Browse by ORGANISM: other species

SASDWV3 – crTPpart2 of RNA helicase (RnaH)

crTPpart2 of RNA helicase (RnaH) experimental SAS data
crTPpart2 of RNA helicase (RnaH) Rg histogram
Sample: CrTPpart2 of RNA helicase (RnaH) monomer, 21 kDa Paulinella chromatophora protein
Buffer: 20 mM HEPES, 300 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Jun 15
The Paulinella chromatophore transit peptide part2 adopts a structural fold similar to the γ-glutamyl-cyclotransferase fold Plant Physiology (2025)
Klimenko V, Reiners J, Applegate V, Reimann K, Popowicz G, Hoeppner A, Papadopoulos A, Smits S, Nowack E
RgGuinier 2.3 nm
Dmax 9.2 nm
VolumePorod 46 nm3

SASDWW3 – crTPpart2 of cysteine synthase A (CysK)

crTPpart2 of cysteine synthase A (CysK) experimental SAS data
crTPpart2 of cysteine synthase A (CysK) Kratky plot
Sample: CrTPpart2 of cysteine synthase A (CysK) monomer, 16 kDa Paulinella chromatophora protein
Buffer: 20 mM HEPES, 300 mM NaCl, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Sep 14
The Paulinella chromatophore transit peptide part2 adopts a structural fold similar to the γ-glutamyl-cyclotransferase fold Plant Physiology (2025)
Klimenko V, Reiners J, Applegate V, Reimann K, Popowicz G, Hoeppner A, Papadopoulos A, Smits S, Nowack E
RgGuinier 1.7 nm
Dmax 6.2 nm
VolumePorod 28 nm3

SASDTR2 – Turkey Avisivirus 2A3 (TuAsV 2A3) polyprotein fragment at pH 5.4

Genome polyprotein experimental SAS data
ALPHAFOLD model
Sample: Genome polyprotein monomer, 13 kDa Turkey avisivirus protein
Buffer: 20 mM citrate pH 5.4, 150 mM NaCl, 2 mM TCEP, 1% glycerol, pH: 5.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 May 2
Solution structure and functional characterization of an avian picornavirus 2AH/NC protein
Anna Wehlin
RgGuinier 1.7 nm
Dmax 7.2 nm
VolumePorod 29 nm3

SASDTS2 – Turkey Avisivirus 2A3 (TuAsV 2A3) polyprotein fragment at pH 6.5

Genome polyprotein experimental SAS data
ALPHAFOLD model
Sample: Genome polyprotein monomer, 13 kDa Turkey avisivirus protein
Buffer: 20mM Citrate buffer pH 6.5, 150mM NaCl, 2mM TCEP, 1% glycerol, pH: 6.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 May 15
Solution structure and functional characterization of an avian picornavirus 2AH/NC protein
Anna Wehlin
RgGuinier 1.6 nm
Dmax 6.0 nm
VolumePorod 27 nm3

SASDTT2 – Turkey Avisivirus 2A3 (TuAsV 2A3) polyprotein fragment at pH 7.4

Genome polyprotein experimental SAS data
ALPHAFOLD model
Sample: Genome polyprotein monomer, 13 kDa Turkey avisivirus protein
Buffer: 20 mM HEPES, 150 mM NaCl, 2 mM TECP, 1% Glycerol, pH: 7.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 May 2
Solution structure and functional characterization of an avian picornavirus 2AH/NC protein
Anna Wehlin
RgGuinier 1.6 nm
Dmax 4.0 nm
VolumePorod 24 nm3

SASDX82 – N-terminal domain of relaxase from Bacillus subtilis conjugative plasmid pLS20

Relaxase experimental SAS data
PHENIX model
Sample: Relaxase monomer, 29 kDa Bacillus subtilis subsp. … protein
Buffer: 20 mM Tris, 300 mM NaCl, 1 mM DTT, pH: 8
Experiment: SAXS data collected at BL11 - NCD, ALBA on 2019 Dec 3
Activation and dimerization of the relaxase from the Bacillus subtilis conjugative plasmid pLS20 by DNA-induced cross-over of the catalytic residue
Isidro Crespo
RgGuinier 2.3 nm
Dmax 7.5 nm
VolumePorod 48 nm3

SASDX92 – N-terminal domain of relaxase from Bacillus subtilis conjugative plasmid pLS20 in complex with the core region

Relaxasecore region, single stranded experimental SAS data
PHENIX model
Sample: Relaxase dimer, 57 kDa Bacillus subtilis subsp. … protein
Core region, single stranded dimer, 12 kDa Bacillus subtilis DNA
Buffer: 20 mM Tris, 300 mM NaCl, 1 mM DTT, pH: 8
Experiment: SAXS data collected at BL11 - NCD, ALBA on 2019 Dec 3
Activation and dimerization of the relaxase from the Bacillus subtilis conjugative plasmid pLS20 by DNA-induced cross-over of the catalytic residue
Isidro Crespo
RgGuinier 2.5 nm
Dmax 8.2 nm
VolumePorod 50 nm3

SASDXX4 – Serratia marcescens poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB

Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB experimental SAS data
ALPHAFOLD model
Sample: Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB monomer, 73 kDa Serratia marcescens protein
Buffer: phosphate-buffered saline, pH: 7.4
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2025 Feb 3
Structural, biophysical and biochemical studies of CAZYmes involved in exopolysaccharides degradation of microbial biofilms Universidade de São Paulo Master's thesis (2025)
Amanda Freitas Cruz
RgGuinier 2.9 nm
Dmax 9.4 nm
VolumePorod 102 nm3

SASDXY4 – Serratia marcescens truncated Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB

Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB experimental SAS data
ALPHAFOLD model
Sample: Poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB monomer, 69 kDa Serratia marcescens protein
Buffer: phosphate-buffered saline, pH: 7.4
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2025 Feb 3
Structural, biophysical and biochemical studies of CAZYmes involved in exopolysaccharides degradation of microbial biofilms Universidade de São Paulo Master's thesis (2025)
Amanda Freitas Cruz
RgGuinier 2.8 nm
Dmax 9.0 nm
VolumePorod 102 nm3

SASDWZ6 – ABC transporter permease protein extracellular domain from S.agalactiae (SaNsrP ECD)

ABC transporter, permease protein, extracellular domain experimental SAS data
ABC transporter, permease protein, extracellular domain Kratky plot
Sample: ABC transporter, permease protein, extracellular domain monomer, 23 kDa Streptococcus agalactiae serotype … protein
Buffer: 25 mM MES, 500 mM NaCl, pH: 6
Experiment: SAXS data collected at BM29, ESRF on 2020 Dec 3
The extracellular domain of SaNSrFP binds bacitracin and allows the identification of new members of the BceAB transporter family Frontiers in Microbiology 16 (2025)
Mammen C, Gottstein J, Cea P, Tantsur K, Reiners J, Bonus M, Gohlke H, Smits S
RgGuinier 2.4 nm
Dmax 9.0 nm
VolumePorod 50 nm3