Browse by ORGANISM: other species

SASDXQ9 – Native state of monomeric full-length glycoside hydrolase family18 chitodextrinase from Vibrio cholerae

Chitodextrinase experimental SAS data
Native state of monomeric full-length glycoside hydrolase family18 chitodextrinase from Vibrio cholerae Rg histogram
Sample: Chitodextrinase monomer, 109 kDa Vibrio cholerae protein
Buffer: 100mM HEPES, 150mM NaCl, pH: 7.5
Experiment: SAXS data collected at TPS13A, NSRRC on 2025 Apr 9
Multi-domain structure of a periplasmic chitodextrinase from Vibrio cholerae (VcChdx)
Kanokbhorn Khumnonkhro
RgGuinier 4.1 nm
Dmax 17.4 nm
VolumePorod 125 nm3

SASDVJ8 – S9 peptidase form Rhizobium radiobacter (6mg/ml)

S9 peptidase form Rhizobium radiobacter experimental SAS data
DAMMIN model
Sample: S9 peptidase form Rhizobium radiobacter monomer, 74 kDa Agrobacterium radiobacter protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21
Structural and functional characterization of S9 peptidase form Rhizobium radiobacter
Dr. Rahul Singh
RgGuinier 3.5 nm
Dmax 9.5 nm
VolumePorod 137 nm3

SASDVK8 – S9 peptidase form Rhizobium radiobacter (4mg/ml)

S9 peptidase form Rhizobium radiobacter experimental SAS data
DAMMIN model
Sample: S9 peptidase form Rhizobium radiobacter monomer, 74 kDa Agrobacterium radiobacter protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21
Structural and functional characterization of S9 peptidase form Rhizobium radiobacter
Dr. Rahul Singh
RgGuinier 3.6 nm
Dmax 9.5 nm
VolumePorod 128 nm3

SASDXM8 – Disordered repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Apr 1
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.7 nm
Dmax 15.4 nm
VolumePorod 52 nm3

SASDXN8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 1 mM CaCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 1 mM CaCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Jun 28
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 2.0 nm
Dmax 8.1 nm
VolumePorod 38 nm3

SASDXP8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 10 mM KCl

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Repeats-in-toxin domain Block V of adenylate cyclase toxin Kratky plot
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 10 mM KCl, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Dec 12
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.7 nm
Dmax 15.6 nm
VolumePorod 50 nm3

SASDXQ8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 1 mM MgCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 1 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Jun 28
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.5 nm
Dmax 14.9 nm
VolumePorod 49 nm3

SASDXR8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 10 mM MgCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 10 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Aug 1
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.8 nm
Dmax 16.3 nm
VolumePorod 61 nm3

SASDXS8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 1 mM SrCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 1 mM SrCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Jun 28
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.1 nm
Dmax 13.0 nm
VolumePorod 35 nm3

SASDXT8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 2 mM SrCl2

Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Repeats-in-toxin domain Block V of adenylate cyclase toxin Kratky plot
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 2 mM SrCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2025 Jul 22
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 2.7 nm
Dmax 11.5 nm
VolumePorod 34 nm3