Browse by ORGANISM: other species

SASDPQ2 – apo-Clostridium butyricum argonaute protein at 10 °C

Clostridium butyricum argonaute protein experimental SAS data
MOLECULAR DYNAMICS FRAME model
Sample: Clostridium butyricum argonaute protein monomer, 86 kDa protein
Buffer: 20 mM Tris–HCl, 250 mM NaCl, 2mM DTT, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2021 May 7
Argonaute protein SAXS investigation
lirong zheng
RgGuinier 3.2 nm
Dmax 9.7 nm
VolumePorod 188 nm3

SASDPR2 – apo-Clostridium butyricum argonaute protein at 37 °C

Clostridium butyricum argonaute protein experimental SAS data
MOLECULAR DYNAMICS FRAME model
Sample: Clostridium butyricum argonaute protein monomer, 86 kDa protein
Buffer: 20 mM Tris–HCl, 250 mM NaCl, 2mM DTT, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2021 May 7
Argonaute protein SAXS investigation
lirong zheng
RgGuinier 3.2 nm
Dmax 9.7 nm
VolumePorod 185 nm3

SASDPS2 – apo-Thermus thermophilus argonaute protein at 10 °C

Piwi domain-containing protein experimental SAS data
MOLECULAR DYNAMICS FRAME model
Sample: Piwi domain-containing protein monomer, 77 kDa Thermus thermophilus (strain … protein
Buffer: 20 mM Tris–HCl, 250 mM NaCl, 2mM DTT, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2021 May 7
Argonaute protein SAXS investigation
lirong zheng
RgGuinier 3.1 nm
Dmax 9.7 nm
VolumePorod 122 nm3

SASDPT2 – apo-Thermus thermophilus argonaute protein at 25 °C

Piwi domain-containing protein experimental SAS data
MOLECULAR DYNAMICS FRAME model
Sample: Piwi domain-containing protein monomer, 77 kDa Thermus thermophilus (strain … protein
Buffer: 20 mM Tris–HCl, 250 mM NaCl, 2mM DTT, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2021 May 7
Argonaute protein SAXS investigation
lirong zheng
RgGuinier 3.1 nm
Dmax 9.7 nm
VolumePorod 120 nm3

SASDPU2 – apo-Thermus thermophilus argonaute protein at 75 °C

Piwi domain-containing protein experimental SAS data
MOLECULAR DYNAMICS FRAME model
Sample: Piwi domain-containing protein monomer, 77 kDa Thermus thermophilus (strain … protein
Buffer: 20 mM Tris–HCl, 250 mM NaCl, 2mM DTT, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2021 May 7
Argonaute protein SAXS investigation
lirong zheng
RgGuinier 3.3 nm
Dmax 9.7 nm
VolumePorod 175 nm3

SASDMS5 – Glutathione S-transferase/RNA recognition motif (RRM)-containing protein 4 fusion

RNA recognition motif (RRM)-containing protein 4 experimental SAS data
Glutathione S-transferase/RNA recognition motif (RRM)-containing protein 4 fusion Rg histogram
Sample: RNA recognition motif (RRM)-containing protein 4 monomer, 111 kDa Ustilago maydis protein
Buffer: 20 mM Hepes, 200 mM NaCl, 1 mM βME, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2021 Apr 30
A MademoiseLLE domain binding platform links the key RNA transporter to endosomes PLOS Genetics 18(6):e1010269 (2022)
Devan S, Schott-Verdugo S, Müntjes K, Bismar L, Reiners J, Hachani E, Schmitt L, Höppner A, Smits S, Gohlke H, Feldbrügge M, Mitchell A
RgGuinier 8.8 nm
Dmax 30.7 nm
VolumePorod 587 nm3

SASDMT5 – N-terminal histidine tagged RNA recognition motif (RRM)-containing protein 4 NT4

RNA recognition motif (RRM)-containing protein 4 NT4 experimental SAS data
N-terminal histidine tagged RNA recognition motif (RRM)-containing protein 4 NT4 Rg histogram
Sample: RNA recognition motif (RRM)-containing protein 4 NT4 monomer, 40 kDa Ustilago maydis protein
Buffer: 20 mM Hepes, 200 mM NaCl, 1 mM βME, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2021 Apr 30
A MademoiseLLE domain binding platform links the key RNA transporter to endosomes PLOS Genetics 18(6):e1010269 (2022)
Devan S, Schott-Verdugo S, Müntjes K, Bismar L, Reiners J, Hachani E, Schmitt L, Höppner A, Smits S, Gohlke H, Feldbrügge M, Mitchell A
RgGuinier 5.6 nm
Dmax 18.5 nm
VolumePorod 123 nm3

SASDNU9 – Mycocerosic acid synthase in its apo form and at neutral pH

Mycocerosic acid synthase experimental SAS data
DAMMIN model
Sample: Mycocerosic acid synthase monomer, 224 kDa Mycobacterium bovis (strain … protein
Buffer: 50 mM Tris-HCl, 50 mM NaCl, 10% glycerol, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2013 Oct 1
Solution structure of the type I polyketide synthase Pks13 from Mycobacterium tuberculosis. BMC Biol 20(1):147 (2022)
Bon C, Cabantous S, Julien S, Guillet V, Chalut C, Rima J, Brison Y, Malaga W, Sanchez-Dafun A, Gavalda S, Quémard A, Marcoux J, Waldo GS, Guilhot C, Mourey L
RgGuinier 5.7 nm
Dmax 21.0 nm
VolumePorod 420 nm3

SASDNV9 – Phenolpthiocerol synthase A of BCG at neutral pH

Phenolpthiocerol synthesis type-I polyketide synthase ppsA experimental SAS data
DAMMIN model
Sample: Phenolpthiocerol synthesis type-I polyketide synthase ppsA monomer, 199 kDa Mycobacterium bovis (strain … protein
Buffer: 50 mM Tris-HCl, 500 mM NaCl, 2 mM EDTA, 10% glycerol, pH: 8
Experiment: SAXS data collected at SWING, SOLEIL on 2012 Jun 14
Solution structure of the type I polyketide synthase Pks13 from Mycobacterium tuberculosis. BMC Biol 20(1):147 (2022)
Bon C, Cabantous S, Julien S, Guillet V, Chalut C, Rima J, Brison Y, Malaga W, Sanchez-Dafun A, Gavalda S, Quémard A, Marcoux J, Waldo GS, Guilhot C, Mourey L
RgGuinier 6.7 nm
Dmax 20.2 nm
VolumePorod 680 nm3

SASDNV5 – Botulinum Toxin E at acidic pH

Botulinum Toxin Serotype E, endonegative experimental SAS data
GROMACS model
Sample: Botulinum Toxin Serotype E, endonegative monomer, 144 kDa Clostridium botulinum protein
Buffer: 10 mM sodium acetate (20 mM ionic strength), pH: 4
Experiment: SAXS data collected at B21, Diamond Light Source on 2019 Oct 6
Elucidation of critical pH-dependent structural changes in Botulinum Neurotoxin E. J Struct Biol :107876 (2022)
Lalaurie CJ, Splevins A, Barata TS, Bunting KA, Higazi DR, Zloh M, Spiteri VA, Perkins SJ, Dalby PA
RgGuinier 4.3 nm
Dmax 15.2 nm
VolumePorod 240 nm3