Small Angle Scattering Biological Data Bank SASBDB

SASBDB entries for UniProt ID:

SASDBR2 – Contactin-associated protein-like 2 (Caspr2) extracellular domains 1-1261.

UniProt ID: Q9UHC6 (1-1261) Contactin-associated protein-like 2 extracellular domains (1-1261)

Contactin-associated protein-like 2 extracellular domains (1-1261) experimental SAS data

Sample:	Contactin-associated protein-like 2 extracellular domains (1-1261) monomer, 140 kDa Homo sapiens protein
Buffer:	10 mM HEPES 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at Anton Paar SAXSess, University of Utah on 2010 Oct 4

Structural Characterization of the Extracellular Domain of CASPR2 and Insights into Its Association with the Novel Ligand Contactin1. J Biol Chem 291(11):5788-802 (2016)
Rubio-Marrero EN, Vincelli G, Jeffries CM, Shaikh TR, Pakos IS, Ranaivoson FM, von Daake S, Demeler B, De Jaco A, Perkins G, Ellisman MH, Trewhella J, Comoletti D

R_g^Guinier	4.4	nm
D_max	14.5	nm
Volume^Porod	282	nm³

SASDBS2 – Recombinant Tn antigen-binding lectin from Vatairea macrocarpa

UniProt ID: P81371 (None-None) Recombinant Tn antigen-binding lectin

Recombinant Tn antigen-binding lectin experimental SAS data

Sample:	Recombinant Tn antigen-binding lectin tetramer, 105 kDa Vatairea macrocarpa protein
Buffer:	100 mM sodium phosphate 150 mM NaCl 5% (v/v) glycerol, pH: 5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2014 Jan 11

Structural characterization of a Vatairea macrocarpa lectin in complex with a tumor-associated antigen: A new tool for cancer research. Int J Biochem Cell Biol 72:27-39 (2016)
Sousa BL, Silva-Filho JC, Kumar P, Graewert MA, Pereira RI, Cunha RMS, Nascimento KS, Bezerra GA, Delatorre P, Djinovic-Carugo K, Nagano CS, Gruber K, Cavada BS

R_g^Guinier	3.2	nm
D_max	9.5	nm
Volume^Porod	168	nm³

SASDBT2 – Ankyrin repeat domains from human Tankyrase-2 (489-649)

UniProt ID: Q9H2K2 (489-649) Ankyrin repeat domains from Tankyrase 2

Ankyrin repeat domains from Tankyrase 2 experimental SAS data

Ankyrin repeat domains from Tankyrase 2 Kratky plot

Sample:	Ankyrin repeat domains from Tankyrase 2 monomer, 18 kDa Homo sapiens protein
Buffer:	50 mM HEPES 100mM NaCl 1mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2014 Dec 4

Hybrid Structural Analysis of the Arp2/3 Regulator Arpin Identifies Its Acidic Tail as a Primary Binding Epitope. Structure 24(2):252-60 (2016)
Fetics S, Thureau A, Campanacci V, Aumont-Nicaise M, Dang I, Gautreau A, Pérez J, Cherfils J

R_g^Guinier	1.8	nm
D_max	6.3	nm
Volume^Porod	24	nm³

SASDBU2 – Human Arpin (isoform 1)

UniProt ID: Q7Z6K5 (None-None) Human Arpin

Sample:	Human Arpin monomer, 25 kDa Homo sapiens protein
Buffer:	50 mM HEPES 100mM NaCl 1mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2014 Dec 4

R_g^Guinier	2.6	nm
D_max	13.2	nm
Volume^Porod	47	nm³

SASDBV2 – Zebrafish Arpin

UniProt ID: Q1LWJ6 (None-None) Zebrafish (Danio rerio) Arpin

Zebrafish (Danio rerio) Arpin experimental SAS data

Zebrafish (Danio rerio) Arpin Kratky plot

Sample:	Zebrafish (Danio rerio) Arpin monomer, 25 kDa Danio rerio protein
Buffer:	50 mM HEPES 100mM NaCl 1mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2014 Dec 4

R_g^Guinier	2.7	nm
D_max	13.8	nm
Volume^Porod	47	nm³

SASDBW2 – Zebrafish (Danio rerio) Arpin truncated C-terminal mutant (delta-C 16).

UniProt ID: Q1LWJ6 (1-210) Zebrafish (Danio rerio) Arpin truncated C-terminal mutant (delta-C 16).

Zebrafish (Danio rerio) Arpin truncated C-terminal mutant (delta-C 16). experimental SAS data

Zebrafish (Danio rerio) Arpin truncated C-terminal mutant (delta-C 16). Kratky plot

Sample:	Zebrafish (Danio rerio) Arpin truncated C-terminal mutant (delta-C 16). monomer, 24 kDa Danio rerio protein
Buffer:	50 mM HEPES 100mM NaCl 1mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2014 Dec 4

R_g^Guinier	2.2	nm
D_max	11.3	nm
Volume^Porod	37	nm³

SASDBY2 – Inorganic pyrophosphatase (PPase) from E. coli

UniProt ID: P0A7A9 (None-None) Inorganic pyrophosphatase (PPase) from E. coli

Inorganic pyrophosphatase (PPase) from E. coli experimental SAS data

Sample:	Inorganic pyrophosphatase (PPase) from E. coli hexamer, 117 kDa Escherichia coli protein
Buffer:	50 mM Tris 10 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Jun 30

X-Ray Solution Scattering Study of Four Escherichia coli Enzymes Involved in Stationary-Phase Metabolism. PLoS One 11(5):e0156105 (2016)
Dadinova LA, Shtykova EV, Konarev PV, Rodina EV, Snalina NE, Vorobyeva NN, Kurilova SA, Nazarova TI, Jeffries CM, Svergun DI

R_g^Guinier	3.0	nm
D_max	9.0	nm
Volume^Porod	166	nm³

SASDBZ2 – Class I fructose-1,6-bisphosphate aldolase (FbaB) from E. coli

UniProt ID: A0A0K4BP99 (None-None) Class I fructose-1,6-bisphosphate aldolase (FbaB) from E. coli

Class I fructose-1,6-bisphosphate aldolase (FbaB) from E. coli experimental SAS data

Sample:	Class I fructose-1,6-bisphosphate aldolase (FbaB) from E. coli decamer, 381 kDa Escherichia coli protein
Buffer:	50 mM Tris 10 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Jun 30

R_g^Guinier	4.4	nm
D_max	12.7	nm
Volume^Porod	484	nm³

SASDB23 – 5-keto-4-deoxyuronate isomerase (KduI) from E. coli

UniProt ID: Q46938 (None-None) 5-keto-4-deoxyuronate isomerase (KduI) from E. coli

5-keto-4-deoxyuronate isomerase (KduI) from E. coli experimental SAS data

Sample:	5-keto-4-deoxyuronate isomerase (KduI) from E. coli None, Escherichia coli protein
Buffer:	50 mM Tris 10 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Jun 20

R_g^Guinier

4.5

SASDB33 – Glutamate decarboxylase alpha (GadA) from E. coli

UniProt ID: P69908 (None-None) Glutamate decarboxylase alpha (GadA) from E. coli

Glutamate decarboxylase alpha (GadA) from E. coli experimental SAS data

Sample:	Glutamate decarboxylase alpha (GadA) from E. coli monomer, 53 kDa Escherichia coli protein
Buffer:	50 mM Tris 10 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2013 Jun 20

R_g^Guinier	4.8	nm
Volume^Porod	410	nm³

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