Small Angle Scattering Biological Data Bank SASBDB

SASBDB entries for UniProt ID:

SASDWB2 – 3 mg/mL β-chitin nanofibers from squid pens with 2.5 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 47 % D₂O - USANS

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

β-chitin nanofibers from squid pensGlcNAc-binding protein A (perdeuterated) experimental SAS data

β-chitin nanofibers from squid pens GlcNAc-binding protein A (perdeuterated) Kratky plot

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at BT5 USANS, NIST Center for Neutron Research on 2020 Dec 4

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWC2 – 2.4 mg/mL β-chitin nanofibers from squid pens with 2 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2019 Sep 21

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWD2 – 2.4 mg/mL β-chitin nanofibers from squid pens with 0.5 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2019 Sep 21

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWE2 – 1.2 mg/mL β-chitin nanofibers from squid pens with 1 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 72 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM Acetate, 72% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2019 Sep 21

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWF2 – 0.48 mg/mL β-chitin nanofibers from squid pens with 1.2 mg/mL perdeuterated N-acetylglucosamine binding Protein A (D-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2019 Sep 21

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWG2 – 3 mg/mL β-chitin nanofibers from squid pens with 2.5 mg/mL non-deuterated N-acetylglucosamine binding Protein A (H-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A

β-chitin nanofibers from squid pensGlcNAc-binding protein A experimental SAS data

β-chitin nanofibers from squid pens GlcNAc-binding protein A Kratky plot

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2020 Aug 18

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWH2 – 3 mg/mL β-chitin nanofibers from squid pens with a mixture of 1.25 mg/mL perdeuterated and 1.25 mg/mL non-deuterated N-acetylglucosamine binding Protein A (D-GbpA/H-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A

β-chitin nanofibers from squid pensGlcNAc-binding protein A (perdeuterated)GlcNAc-binding protein A experimental SAS data

β-chitin nanofibers from squid pens GlcNAc-binding protein A (perdeuterated) GlcNAc-binding protein A Kratky plot

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein GlcNAc-binding protein A monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2020 Aug 18

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWJ2 – 3 mg/mL β-chitin nanofibers from squid pens with a mixture of 0.625 mg/mL perdeuterated and 1.875 mg/mL non-deuterated N-acetylglucosamine binding Protein A (D-GbpA/H-GbpA) in 47 % D₂O

UniProt ID: None (None-None) β-chitin nanofibers from squid pens

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A (perdeuterated)

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A

Sample:	Β-chitin nanofibers from squid pens None, Squid GlcNAc-binding protein A (perdeuterated) monomer, 51 kDa Vibrio cholerae serotype … protein GlcNAc-binding protein A monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	20 mM acetate, 47% v/v D₂O, pH: 5
Experiment:	SANS data collected at D11, ILL on 2020 Aug 18

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

SASDWL2 – C-terminal mini-Collagen VI heterotrimer

UniProt ID: P12109 (566-1028) Collagen alpha-1(VI) chain

UniProt ID: P12110 (564-1019) Collagen alpha-2(VI) chain (R680H, K966N, Q967E)

UniProt ID: P12111 (2347-2820) Collagen alpha-3(VI) chain (D2357R, K2367R, D2431V, R2441T, R2609A, R2610A)

Collagen alpha-1(VI) chainCollagen alpha-2(VI) chain (R680H, K966N, Q967E)Collagen alpha-3(VI) chain (D2357R, K2367R, D2431V, R2441T, R2609A, R2610A) experimental SAS data

Sample:	Collagen alpha-1(VI) chain, 52 kDa Homo sapiens protein Collagen alpha-2(VI) chain (R680H, K966N, Q967E), 53 kDa Homo sapiens protein Collagen alpha-3(VI) chain (D2357R, K2367R, D2431V, R2441T, R2609A, R2610A), 54 kDa Homo sapiens protein
Buffer:	Tris-buffered saline, pH: 7.4
Experiment:	SAXS data collected at B21, Diamond Light Source on 2022 Jul 27

Collagen VI microfibril structure reveals mechanism for molecular assembly and clustering of inherited pathogenic mutations. Nat Commun 16(1):7549 (2025)
Godwin ARF, Becker MH, Dajani R, Snee M, Roseman AM, Baldock C

R_g^Guinier	4.8	nm
D_max	18.7	nm
Volume^Porod	478	nm³

SASDWM2 – Wild-type E3 ubiquitin-protein ligase PRT1 (Proteolysis1)

UniProt ID: Q8LBL5 (1-410) E3 ubiquitin-protein ligase PRT1

E3 ubiquitin-protein ligase PRT1 experimental SAS data

Sample:	E3 ubiquitin-protein ligase PRT1 monomer, 46 kDa Arabidopsis thaliana protein
Buffer:	50 mM Tris-HCl, 150 mM NaCl, 1 mM TCEP, 2% w/v glycerol, pH: 7.5
Experiment:	SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2018 May 22

Structural basis for the recognition and ubiquitylation of type-2 N-degron substrate by PRT1 plant N-recognin Nature Communications 16(1) (2025)
Yang W, Kim S, Kim M, Shin H, Lee J, Sandmann A, Park O, Dissmeyer N, Song H

R_g^Guinier	3.4	nm
D_max	12.7	nm
Volume^Porod	61	nm³

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