Small Angle Scattering Biological Data Bank SASBDB

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SASDNU4 – Di[3-deoxy-D-manno-octulosonyl]-lipid A ammonium salt deposited onto silicon wafer (oriented sample anisotropic scattering, KDO2 control)

Di[3-deoxy-D-manno-octulosonyl]-lipid A (ammonium salt) experimental SAS data

Sample:	Di[3-deoxy-D-manno-octulosonyl]-lipid A (ammonium salt), unidentified lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Apr 1

Antimicrobial Peptide Mechanism Studied by Scattering-Guided Molecular Dynamics Simulation. J Phys Chem B (2022)
Allsopp R, Pavlova A, Cline T, Salyapongse AM, Gillilan RE, Di YP, Deslouches B, Klauda JB, Gumbart JC, Tristram-Nagle S

SASDNV4 – Di[3-deoxy-D-manno-octulosonyl]-lipid A ammonium salt deposited onto silicon wafer in the presence of antimicrobial peptide WLBU2 (oriented sample anisotropic scattering, KDO2-WLBU2)

Di[3-deoxy-D-manno-octulosonyl]-lipid A (ammonium salt) plus WLBU2 experimental SAS data

Sample:	Di[3-deoxy-D-manno-octulosonyl]-lipid A (ammonium salt) plus WLBU2, unidentified lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Apr 1

SASDNW4 – Gram-negative bacteria lipid membrane mimic deposited onto silicon wafer (oriented sample anisotropic scattering)

1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol) sodium salt, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phospho]-sn-glycerol (7:2:1) experimental SAS data

Sample:	1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol) sodium salt, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phospho]-sn-glycerol (7:2:1), lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at ID7A1 BioSAXS / HP-Bio Beamline, Cornell High Energy Synchrotron Source (CHESS) on 2021 Jun 23

SASDNX4 – Gram-negative bacteria lipid membrane mimic deposited onto silicon wafer in the presence of antimicrobial peptide WLBU2 (oriented sample anisotropic scattering)

1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanol, 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol) sodium salt, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phospho]-sn-glycerol sodium salt, WLBU2 experimental SAS data

Sample:	1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanol, 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol) sodium salt, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phospho]-sn-glycerol sodium salt, WLBU2, synthetic construct lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Apr 1

SASDNY4 – Gram-positive bacteria lipid membrane mimic deposited onto silicon wafer (oriented sample anisotropic scattering)

1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol), 1,2-dioleoyl-3-trimethylammonium-propane, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phos experimental SAS data

Sample:	1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol), 1,2-dioleoyl-3-trimethylammonium-propane, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phos, lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Apr 1

SASDNZ4 – Gram-positive bacteria lipid membrane mimic deposited onto silicon wafer in the presence of antimicrobial peptide WLBU2 (oriented sample anisotropic scattering)

Sample:	1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(10-rac-glycerol), 1,2-dioleoyl-3-trimethylammonium-propane, 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine, 10,30-bis-[1,2-dioleoyl-sn-glycero-3-phos, synthetic construct lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Apr 1

SASDN25 – Lipopolysaccharide outer membrane of the Gram-negative bacteria Pseudomonas aeruginosa deposited onto silicon wafer (oriented sample anisotropic scattering, LPS control)

Lipopolysaccharide experimental SAS data

Sample:	Lipopolysaccharide, Pseudomonas aeruginosa lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Jun 1

SASDN35 – Lipopolysaccharide outer membrane of the Gram-negative bacteria Pseudomonas aeruginosa deposited onto silicon wafer in the presence of antimicrobial peptide WLBU2 (LPS-WLBU2, oriented sample anisotropic scattering)

Lipopolysaccharide plus WLBU2 experimental SAS data

Sample:	Lipopolysaccharide plus WLBU2 dimer, Pseudomonas aeruginosa lipid
Buffer:	water, pH: 7
Experiment:	SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2018 Jun 1

SASDMX7 – Human histone deacetylase 6

Histone deacetylase 6 experimental SAS data

Human histone deacetylase 6 Rg histogram

Sample:	Histone deacetylase 6 monomer, 131 kDa Homo sapiens protein
Buffer:	30 mM HEPES, 140 mM NaCl, 10 mM KCl, 0.25 mM TCEP, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Dec 10

In-solution structure and oligomerization of human histone deacetylase 6 - an integrative approach. FEBS J (2022)
Shukla S, Komarek J, Novakova Z, Nedvedova J, Ustinova K, Vankova P, Kadek A, Uetrecht C, Mertens H, Barinka C

R_g^Guinier	7.0	nm
D_max	26.0	nm
Volume^Porod	316	nm³

SASDNM7 – Protease 1 from Pyrococcus horikoshii (PhP1) in Gd-HPDO3A

Sample:	Deglycase PH1704 hexamer, 112 kDa Pyrococcus horikoshii (strain … protein
Buffer:	20 mM Tris pH 7.5, 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2016 Jun 7

Medical contrast agents as promising tools for biomacromolecular SAXS experiments. Acta Crystallogr D Struct Biol 78(Pt 9):1120-1130 (2022)
Gabel F, Engilberge S, Schmitt E, Thureau A, Mechulam Y, Pérez J, Girard E

R_g^Guinier	3.2	nm
D_max	9.2	nm
Volume^Porod	140	nm³

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