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SASDGP5 – Vibrio cholerae DciA

DciA experimental SAS data
DciA Kratky plot
Sample: DciA monomer, 18 kDa Vibrio cholerae serotype … protein
Buffer: 20 mM Tris-HCl, 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2017 Mar 26
Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase. Nucleic Acids Res (2021)
Marsin S, Adam Y, Cargemel C, Andreani J, Baconnais S, Legrand P, Li de la Sierra-Gallay I, Humbert A, Aumont-Nicaise M, Velours C, Ochsenbein F, Durand D, Le Cam E, Walbott H, Possoz C, Quevillon-Cheruel S, Ferat JL
RgGuinier 2.7 nm
Dmax 10.1 nm
VolumePorod 26 nm3

SASDGQ5 – Vibrio cholerae hexameric DnaB helicase with bound ATP (VcDnaB.ATP)

Replicative DNA helicase (DnaB) experimental SAS data
Replicative DNA helicase (DnaB) Kratky plot
Sample: Replicative DNA helicase (DnaB) hexamer, 317 kDa Vibrio cholerae serotype … protein
Buffer: 20 mM Tris-HCl, 100 mM NaCl, 1 mM ATP, pH: 8.8
Experiment: SAXS data collected at SWING, SOLEIL on 2018 Oct 4
Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase. Nucleic Acids Res (2021)
Marsin S, Adam Y, Cargemel C, Andreani J, Baconnais S, Legrand P, Li de la Sierra-Gallay I, Humbert A, Aumont-Nicaise M, Velours C, Ochsenbein F, Durand D, Le Cam E, Walbott H, Possoz C, Quevillon-Cheruel S, Ferat JL
RgGuinier 4.6 nm
Dmax 13.0 nm
VolumePorod 585 nm3

SASDGR5 – The Vibrio cholerae DciA/DnaB helicase complex in the presence of bound ATP (VcDnaB.DciA.ATP)

DnaB helicase complexed with ATPDciA experimental SAS data
DnaB helicase complexed with ATP DciA Kratky plot
Sample: DnaB helicase complexed with ATP hexamer, 317 kDa Vibrio cholerae serotype … protein
DciA, 55 kDa Vibrio cholerae serotype … protein
Buffer: 20 mM Tris-HCl, 100 mM NaCl, 1 mM ATP, pH: 8.8
Experiment: SAXS data collected at SWING, SOLEIL on 2018 Oct 4
Study of the DnaB:DciA interplay reveals insights into the primary mode of loading of the bacterial replicative helicase. Nucleic Acids Res (2021)
Marsin S, Adam Y, Cargemel C, Andreani J, Baconnais S, Legrand P, Li de la Sierra-Gallay I, Humbert A, Aumont-Nicaise M, Velours C, Ochsenbein F, Durand D, Le Cam E, Walbott H, Possoz C, Quevillon-Cheruel S, Ferat JL
RgGuinier 5.0 nm
Dmax 15.6 nm
VolumePorod 670 nm3

SASDPG8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 2.6

M18D170V209D170M18 experimental SAS data
M18D170V209D170M18 Kratky plot
Sample: M18D170V209D170M18 monomer, 1 kDa
Buffer: H20, pH: 2.6
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5
Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films Advanced Functional Materials 31(32):2102905 (2021)
Jung F, Schart M, Bührend L, Meidinger E, Kang J, Niebuur B, Ariaee S, Molodenskiy D, Posselt D, Amenitsch H, Tsitsilianis C, Papadakis C
RgGuinier 8.7 nm

SASDPH8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 5.0

M18D170V209D170M18 experimental SAS data
M18D170V209D170M18 Kratky plot
Sample: M18D170V209D170M18 monomer, 1 kDa
Buffer: H2O, pH: 5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5
Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films Advanced Functional Materials 31(32):2102905 (2021)
Jung F, Schart M, Bührend L, Meidinger E, Kang J, Niebuur B, Ariaee S, Molodenskiy D, Posselt D, Amenitsch H, Tsitsilianis C, Papadakis C
RgGuinier 8.2 nm

SASDPJ8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 6.9

M18D170V209D170M18 experimental SAS data
M18D170V209D170M18 Kratky plot
Sample: M18D170V209D170M18 monomer, 1 kDa
Buffer: H2O, pH: 6.9
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5
Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films Advanced Functional Materials 31(32):2102905 (2021)
Jung F, Schart M, Bührend L, Meidinger E, Kang J, Niebuur B, Ariaee S, Molodenskiy D, Posselt D, Amenitsch H, Tsitsilianis C, Papadakis C
RgGuinier 5.4 nm

SASDPK8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 8.9

M18D170V209D170M18 experimental SAS data
M18D170V209D170M18 Kratky plot
Sample: M18D170V209D170M18 monomer, 1 kDa
Buffer: H2O, pH: 8.9
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5
Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films Advanced Functional Materials 31(32):2102905 (2021)
Jung F, Schart M, Bührend L, Meidinger E, Kang J, Niebuur B, Ariaee S, Molodenskiy D, Posselt D, Amenitsch H, Tsitsilianis C, Papadakis C
RgGuinier 7.3 nm

SASDJ96 – Trinucleosomes from Xenopus laevis (African clawed frog)

Histone H3Histone H4Histone H2A type 1Histone H2BNon-linker Ended Trinucleosome DNA experimental SAS data
Histone H3 Histone H4 Histone H2A type 1 Histone H2B Non-linker Ended Trinucleosome DNA Kratky plot
Sample: Histone H3 monomer, 15 kDa Xenopus laevis protein
Histone H4 monomer, 11 kDa Xenopus laevis protein
Histone H2A type 1 monomer, 14 kDa Xenopus laevis protein
Histone H2B monomer, 14 kDa Xenopus laevis protein
Non-linker Ended Trinucleosome DNA monomer, 172 kDa DNA
Buffer: 20 mM Tris 150 mM NaCl 1 mM EDTA 1 mM DTT 50% w/v sucrose, pH: 7.5
Experiment: SAXS data collected at G1, Cornell High Energy Synchrotron Source (CHESS) on 2016 Mar 11
Solution structure(s) of trinucleosomes from contrast variation SAXS Nucleic Acids Research (2021)
Mauney A, Muthurajan U, Luger K, Pollack L
RgGuinier 12.9 nm
Dmax 41.8 nm

SASDK76 – Polymerase delta-interacting protein 2 (POLDIP2, amino acids 51-368)

Polymerase delta-interacting protein 2 experimental SAS data
Polymerase delta-interacting protein 2 Kratky plot
Sample: Polymerase delta-interacting protein 2 monomer, 37 kDa Homo sapiens protein
Buffer: 20 mM HEPES pH 7.5, 500 mM NaCl, 5% (v/v) glycerol, pH: 7.5
Experiment: SAXS data collected at Bruker Nanostar, University of Huddersfield on 2019 Jul 18
Crystal structure and molecular dynamics of human POLDIP2, a multifaceted adaptor protein in metabolism and genome stability. Protein Sci (2021)
Kulik AA, Maruszczak KK, Thomas DC, Nabi-Aldridge NLA, Carr M, Bingham RJ, Cooper CDO
RgGuinier 2.2 nm
Dmax 7.2 nm
VolumePorod 56 nm3

SASDJL9 – Saposin-A monomer

Prosaposin (Saposin A) experimental SAS data
Prosaposin (Saposin A) Kratky plot
Sample: Prosaposin (Saposin A) monomer, 10 kDa Homo sapiens protein
Buffer: 25 mM Tris-HCl, 150 mM NaCl, pH: 7.5
Experiment: SAXS data collected at 12-ID-B SAXS/WAXS, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Feb 18
Stable Picodisc Assemblies from Saposin Proteins and Branched Detergents. Biochemistry 60(14):1108-1119 (2021)
Kurgan KW, Chen B, Brown KA, Falco Cobra P, Ye X, Ge Y, Gellman SH
RgGuinier 1.5 nm
Dmax 5.0 nm
VolumePorod 23 nm3