Browse by MODEL: No model

SASDU27 – The DNA binding domain and intrinsically disordered region of NAC domain-containing protein 13 (ANAC013; amino acids 1-274)

NAC domain-containing protein 13 experimental SAS data
NAC domain-containing protein 13 Kratky plot
Sample: NAC domain-containing protein 13 dimer, 63 kDa Arabidopsis thaliana protein
Buffer: 20 mM HEPES, 150 mM NaCl, 5 mM NaNO3, 5 mM TCEP, pH: 7.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Oct 3
Allovalent scavenging of activation domains in the transcription factor ANAC013 gears transcriptional regulation. Nucleic Acids Res 53(4) (2025)
Delaforge E, Due AD, Theisen FF, Morffy N, O'Shea C, Blackledge M, Strader LC, Skriver K, Kragelund BB
RgGuinier 3.8 nm
Dmax 17.0 nm
VolumePorod 118 nm3

SASDU37 – The intrinsically disordered region of NAC domain-containing protein 13 (ANAC013; amino acids 161-274)

NAC domain-containing protein 13 experimental SAS data
NAC domain-containing protein 13 Kratky plot
Sample: NAC domain-containing protein 13 monomer, 13 kDa Arabidopsis thaliana protein
Buffer: 20 mM HEPES, 150 mM NaCl, 5 mM NaNO3, 5 mM TCEP, pH: 7.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Oct 3
Allovalent scavenging of activation domains in the transcription factor ANAC013 gears transcriptional regulation. Nucleic Acids Res 53(4) (2025)
Delaforge E, Due AD, Theisen FF, Morffy N, O'Shea C, Blackledge M, Strader LC, Skriver K, Kragelund BB
RgGuinier 3.6 nm
Dmax 16.0 nm
VolumePorod 36 nm3

SASDVZ3 – SARS-CoV2 RNA pseudoknot at 4 mg/mL

SARS-CoV2 RNA pseudoknot experimental SAS data
SARS-CoV2 RNA pseudoknot Kratky plot
Sample: SARS-CoV2 RNA pseudoknot monomer, 22 kDa Severe acute respiratory … RNA
Buffer: 25 mM potassium phosphate, 50 mM KCl, pH: 6.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Nov 22
Optimization of Structure‐Guided Development of Chemical Probes for the Pseudoknot RNA of the Frameshift Element in SARS‐CoV‐2 Angewandte Chemie International Edition (2025)
Ceylan B, Adam J, Toews S, Kaiser F, Dörr J, Scheppa D, Tants J, Smart A, Schoth J, Philipp S, Stirnal E, Ferner J, Richter C, Sreeramulu S, Caliskan N, Schlundt A, Weigand J, Göbel M, Wacker A, Schwalbe H
RgGuinier 2.3 nm
Dmax 7.9 nm
VolumePorod 29 nm3

SASDV24 – SARS-CoV2 RNA pseudoknot at 2 mg/mL

SARS-CoV2 RNA pseudoknot experimental SAS data
SARS-CoV2 RNA pseudoknot Kratky plot
Sample: SARS-CoV2 RNA pseudoknot monomer, 22 kDa Severe acute respiratory … RNA
Buffer: 25 mM potassium phosphate, 50 mM KCl, pH: 6.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Nov 22
Optimization of Structure‐Guided Development of Chemical Probes for the Pseudoknot RNA of the Frameshift Element in SARS‐CoV‐2 Angewandte Chemie International Edition (2025)
Ceylan B, Adam J, Toews S, Kaiser F, Dörr J, Scheppa D, Tants J, Smart A, Schoth J, Philipp S, Stirnal E, Ferner J, Richter C, Sreeramulu S, Caliskan N, Schlundt A, Weigand J, Göbel M, Wacker A, Schwalbe H
RgGuinier 2.5 nm
Dmax 8.9 nm
VolumePorod 32 nm3

SASDV34 – SARS-CoV2 RNA pseudoknot at 1 mg/mL

SARS-CoV2 RNA pseudoknot experimental SAS data
SARS-CoV2 RNA pseudoknot Kratky plot
Sample: SARS-CoV2 RNA pseudoknot monomer, 22 kDa Severe acute respiratory … RNA
Buffer: 25 mM potassium phosphate, 50 mM KCl, pH: 6.2
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Nov 22
Optimization of Structure‐Guided Development of Chemical Probes for the Pseudoknot RNA of the Frameshift Element in SARS‐CoV‐2 Angewandte Chemie International Edition (2025)
Ceylan B, Adam J, Toews S, Kaiser F, Dörr J, Scheppa D, Tants J, Smart A, Schoth J, Philipp S, Stirnal E, Ferner J, Richter C, Sreeramulu S, Caliskan N, Schlundt A, Weigand J, Göbel M, Wacker A, Schwalbe H
RgGuinier 2.5 nm
Dmax 9.5 nm
VolumePorod 32 nm3

SASDW43 – Telomere DNA G-quadruplex (2GKU) at neutral pH

Telomere DNA G-quadruplex Hybrid-1 form experimental SAS data
Telomere DNA G-quadruplex Hybrid-1 form Kratky plot
Sample: Telomere DNA G-quadruplex Hybrid-1 form monomer, 8 kDa synthetic construct DNA
Buffer: 6 mM Na2HPO4, 2 mM NaH2PO4, 1 mM Na2EDTA, 185 mM KCl, pH: 7.2
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Aug 11
Early events in G-quadruplex folding captured by time-resolved small-angle X-ray scattering. Nucleic Acids Res 53(3) (2025)
Monsen RC, Sabo TM, Gray R, Hopkins JB, Chaires JB
RgGuinier 1.2 nm
Dmax 3.8 nm
VolumePorod 8 nm3

SASDW53 – Telomere DNA G-quadruplex (2JSL) at neutral pH

Telomere DNA G-quadruplex Hybrid-2 form experimental SAS data
Telomere DNA G-quadruplex Hybrid-2 form Kratky plot
Sample: Telomere DNA G-quadruplex Hybrid-2 form monomer, 8 kDa synthetic construct DNA
Buffer: 6 mM Na2HPO4, 2 mM NaH2PO4, 1 mM Na2EDTA, 185 mM KCl, pH: 7.2
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Aug 11
Early events in G-quadruplex folding captured by time-resolved small-angle X-ray scattering. Nucleic Acids Res 53(3) (2025)
Monsen RC, Sabo TM, Gray R, Hopkins JB, Chaires JB
RgGuinier 1.2 nm
Dmax 3.8 nm
VolumePorod 8 nm3

SASDW63 – Telomere DNA G-quadruplex (2GKU) at neutral pH with LiCl

Telomere DNA G-quadruplex Hybrid-1 form experimental SAS data
Telomere DNA G-quadruplex Hybrid-1 form Kratky plot
Sample: Telomere DNA G-quadruplex Hybrid-1 form monomer, 8 kDa synthetic construct DNA
Buffer: 6 mM Li2HPO4, 2 mM LiH2PO4, 1 mM EDTA, 185 mM LiCl, pH 7.2, pH: 7.2
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Aug 11
Early events in G-quadruplex folding captured by time-resolved small-angle X-ray scattering. Nucleic Acids Res 53(3) (2025)
Monsen RC, Sabo TM, Gray R, Hopkins JB, Chaires JB
RgGuinier 1.2 nm
Dmax 4.3 nm
VolumePorod 7 nm3

SASDW73 – Telomere DNA G-quadruplex (2JSL) at neutral pH with LiCl

Telomere DNA G-quadruplex Hybrid-2 form experimental SAS data
Telomere DNA G-quadruplex Hybrid-2 form Kratky plot
Sample: Telomere DNA G-quadruplex Hybrid-2 form monomer, 8 kDa synthetic construct DNA
Buffer: 6 mM Li2HPO4, 2 mM LiH2PO4, 1 mM EDTA, 185 mM LiCl, pH 7.2, pH: 7.2
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Aug 12
Early events in G-quadruplex folding captured by time-resolved small-angle X-ray scattering. Nucleic Acids Res 53(3) (2025)
Monsen RC, Sabo TM, Gray R, Hopkins JB, Chaires JB
RgGuinier 1.3 nm
Dmax 5.1 nm
VolumePorod 8 nm3

SASDW83 – Telomere DNA G-quadruplex (2GKU) at alkaline pH

Telomere DNA G-quadruplex Hybrid-1 form experimental SAS data
Telomere DNA G-quadruplex Hybrid-1 form Kratky plot
Sample: Telomere DNA G-quadruplex Hybrid-1 form monomer, 8 kDa synthetic construct DNA
Buffer: 6 mM Na2HPO4, 2 mM NaH2PO4, 1 mM Na2EDTA, 185 mM KCl, pH 11.5, pH: 11.5
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Aug 12
Early events in G-quadruplex folding captured by time-resolved small-angle X-ray scattering. Nucleic Acids Res 53(3) (2025)
Monsen RC, Sabo TM, Gray R, Hopkins JB, Chaires JB
RgGuinier 2.4 nm
Dmax 8.3 nm
VolumePorod 12 nm3