Browse by ORGANISM: other species

SASDEA8 – Full length of DnaG (DNA Primase) from Bacillus subtilis

DNA primase experimental SAS data
CORAL model
Sample: DNA primase monomer, 69 kDa Bacillus subtilis protein
Buffer: 25 mM Tris-HCl,100 mM NaCl, pH: 8
Experiment: SAXS data collected at BL19U2, Shanghai Synchrotron Radiation Facility (SSRF) on 2018 Oct 1
Full length of DnaG primase from Bacillus subtilis
Zhongchuan Liu
RgGuinier 3.7 nm
Dmax 14.5 nm
VolumePorod 119 nm3

SASDB85 – Self-processing module of iron-regulated protein FrpC (415-591)

Iron-regulated protein FrpC (amino acids 415-591) experimental SAS data
OTHER model
Sample: Iron-regulated protein FrpC (amino acids 415-591) monomer, 19 kDa Neisseria meningitidis protein
Buffer: 5 mM Tris 50 mM NaCl 10 mM CaCl2 0.1% NaN3, pH: 7.4
Experiment: SAXS data collected at Rigaku BioSAXS-1000, CEITEC on 2013 Oct 3
Self-processing module of Iron-regulated protein FrpC
Vojtěch Kubáň
RgGuinier 1.7 nm
Dmax 4.5 nm
VolumePorod 21 nm3

SASDCD8 – Horse spleen apoferritin (WAXS)

Horse spleen apoferritin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Horse spleen apoferritin 24-mer, 476 kDa Equus caballus protein
Buffer: tbs, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jul 15
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 6.3 nm

SASDCE8 – Beta amylase from sweet potato (WAXS)

Beta-amylase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Beta-amylase tetramer, 224 kDa Ipomoea batatas protein
Buffer: tbs, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jul 15
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 4.0 nm

SASDCH8 – Horse heart cytochrome C (WAXS)

Cytochrome c experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Cytochrome c monomer, 12 kDa Equus caballus protein
Buffer: tbs, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jul 16
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.2 nm

SASDCJ8 – Glucose isomerase (WAXS)

Xylose isomerase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Xylose isomerase tetramer, 172 kDa Streptomyces rubiginosus protein
Buffer: 100 mM tris pH 8.0, 100 mM NaCl, 1 mM MgCl2, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Oct 17
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 3.2 nm

SASDCK8 – Lysozyme (WAXS)

Lysozyme C experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Lysozyme C monomer, 14 kDa Gallus gallus protein
Buffer: 40 mM Sodium Acetate pH 4.0, 50 mM NaCl, pH: 4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 May 31
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.4 nm

SASDCL8 – Horse myoglobin (WAXS)

Myoglobin experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Myoglobin monomer, 17 kDa Equus caballus protein
Buffer: 100 mM tris pH 7.5, 100 mM NaCl, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2015 Jun 2
WAXS benchmark on standard proteins
Maxim Petoukhov
RgGuinier 1.6 nm

SASDL53 – Gloeobacter violaceus Ligand-Gated Ion Channel (GLIC) at pH 7.5 measured with continuous-flow SEC-SANS

Proton-gated ion channel experimental SAS data
Proton-gated ion channel Kratky plot
Sample: Proton-gated ion channel pentamer, 183 kDa Gloeobacter violaceus (strain … protein
Buffer: D2O, 20 mM Tris, 150 mM NaCl, 0.5 mM matched-out deuterated DDM,, pH: 7.5
Experiment: SANS data collected at D22, Institut Laue-Langevin (ILL) on 2019 Jun 20
Probing solution structure of the pentameric ligand-gated ion channel GLIC by small-angle neutron scattering Proceedings of the National Academy of Sciences 118(37):e2108006118 (2021)
Lycksell M, Rovšnik U, Bergh C, Johansen N, Martel A, Porcar L, Arleth L, Howard R, Lindahl E
RgGuinier 3.8 nm
Dmax 12.0 nm
VolumePorod 235 nm3

SASDL33 – Gloeobacter violaceus Ligand-Gated Ion Channel (GLIC) at pH 7.5 measured with paused-flow SEC-SANS

Proton-gated ion channel experimental SAS data
GROMACS model
Sample: Proton-gated ion channel pentamer, 183 kDa Gloeobacter violaceus (strain … protein
Buffer: D2O, 20 mM Tris, 150 mM NaCl, 0.5 mM matched-out deuterated DDM,, pH: 7.5
Experiment: SANS data collected at D22, Institut Laue-Langevin (ILL) on 2020 Aug 22
Probing solution structure of the pentameric ligand-gated ion channel GLIC by small-angle neutron scattering Proceedings of the National Academy of Sciences 118(37):e2108006118 (2021)
Lycksell M, Rovšnik U, Bergh C, Johansen N, Martel A, Porcar L, Arleth L, Howard R, Lindahl E
RgGuinier 3.8 nm
Dmax 13.5 nm
VolumePorod 274 nm3