Small Angle Scattering Biological Data Bank SASBDB

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SASDEG6 – Epstein-Barr nuclear antigen 2 (EBNA2 Type2, amino acids 348-422)

Epstein-Barr nuclear antigen 2 experimental SAS data

Sample:	Epstein-Barr nuclear antigen 2 dimer, 16 kDa Human gammaherpesvirus 4 protein
Buffer:	20mM Tris-HCl, 100mM NaCl, 2% Sucrose and 1mM TCEP, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2017 Sep 23

Increased association between Epstein-Barr virus EBNA2 from type 2 strains and the transcriptional repressor BS69 restricts B cell growth (2018)
Ponnusamy R, Khatri R, Correia P, Mancini E, Farrell P, West M

R_g^Guinier	2.8	nm
D_max	10.4	nm
Volume^Porod	20	nm³

SASDDH3 – Solution Structure of Archaeal Biofilm Regulator 2 (AbfR2)

Transcriptional regulator Lrs14-like protein experimental SAS data

Sample:	Transcriptional regulator Lrs14-like protein dimer, 33 kDa Sulfolobus acidocaldarius protein
Buffer:	300 mM NaCl, 20 mM HEPES, pH 7.5, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2016 May 5

Crystal structure of an Lrs14-like archaeal biofilm regulator from Sulfolobus acidocaldarius. Acta Crystallogr D Struct Biol 74(Pt 11):1105-1114 (2018)
Vogt MS, Völpel SL, Albers SV, Essen LO, Banerjee A

R_g^Guinier	2.9	nm
D_max	10.0	nm
Volume^Porod	57	nm³

SASDDY5 – AMPA subtype ionotropic Glutamate receptor GluA2 in the resting state (apo), in stealth DDM detergents

Glutamate receptor 2 experimental SAS data

Sample:	Glutamate receptor 2 monomer, 368 kDa Rattus norvegicus protein
Buffer:	D2O based buffer. 20 mM Tris/DCl, 100 mM NaCl, 0.5 mM deuterated n-dodecyl-β-D-maltopyranoside (synthesized to match out at 100% D2O), pH: 7.5
Experiment:	SANS data collected at KWS1, FRM2 on 2017 Sep 19

Small-angle neutron scattering studies on the AMPA receptor GluA2 in the resting, AMPA-bound and GYKI-53655-bound states. IUCrJ 5(Pt 6):780-793 (2018)
Larsen AH, Dorosz J, Thorsen TS, Johansen NT, Darwish T, Midtgaard SR, Arleth L, Kastrup JS

R_g^Guinier	6.0	nm
D_max	17.9	nm
Volume^Porod	396	nm³

SASDDZ5 – AMPA subtype ionotropic Glutamate receptor GluA2 in the AMPA bound state, in stealth DDM detergents, pH 7.5

Sample:	Glutamate receptor 2 monomer, 368 kDa Rattus norvegicus protein
Buffer:	D2O based buffer. 1 mM AMPA, 20 mM Tris/DCl, 100 mM NaCl, 0.5 mM deuterated n-dodecyl-β-D-maltopyranoside (synthesized to match out at 100% D2O), pH: 7.5
Experiment:	SANS data collected at KWS1, FRM2 on 2016 Oct 19

R_g^Guinier	6.3	nm
D_max	18.4	nm
Volume^Porod	407	nm³

SASDD26 – AMPA subtype ionotropic Glutamate receptor GluA2 in the AMPA bound state, in stealth DDM detergents, pH 5.5

Sample:	Glutamate receptor 2 monomer, 368 kDa Rattus norvegicus protein
Buffer:	D2O based buffer. 10 mM AMPA, 20 mM Tris/DCl, 100 mM NaCl, 0.5 mM deuterated n-dodecyl-β-D-maltopyranoside (synthesized to match out at 100% D2O), pH: 5.5
Experiment:	SANS data collected at KWS1, FRM2 on 2017 Sep 19

R_g^Guinier	6.5	nm
D_max	18.9	nm
Volume^Porod	899	nm³

SASDD36 – AMPA subtype ionotropic Glutamate receptor GluA2 in the GYKI-53655 bound state, in stealth DDM detergents

Sample:	Glutamate receptor 2 monomer, 368 kDa Rattus norvegicus protein
Buffer:	D2O based buffer. 1 mM GYKI-53655, 20 mM Tris/DCl, 100 mM NaCl, 0.5 mM deuterated n-dodecyl-β-D-maltopyranoside (synthesized to match out at 100% D2O), pH: 7.5
Experiment:	SANS data collected at KWS1, FRM2 on 2016 Oct 19

R_g^Guinier	6.3	nm
D_max	18.6	nm
Volume^Porod	384	nm³

SASDEF3 – Paenibacillus xanthan lyase (PXL) at 4 °C

Paenibacillus xanthan lyase experimental SAS data

Sample:	Paenibacillus xanthan lyase monomer, 113 kDa Paenibacillus sp-62047 protein
Buffer:	20 mM Tris,, pH: 8.5
Experiment:	SAXS data collected at BM29, ESRF on 2016 Dec 15

Structure and Dynamics of a Promiscuous Xanthan Lyase from Paenibacillus nanensis and the Design of Variants with Increased Stability and Activity. Cell Chem Biol 26(2):191-202.e6 (2019)
Jensen PF, Kadziola A, Comamala G, Segura DR, Anderson L, Poulsen JN, Rasmussen KK, Agarwal S, Sainathan RK, Monrad RN, Svendsen A, Nielsen JE, Lo Leggio L, Rand KD

R_g^Guinier	3.7	nm
D_max	13.1	nm
Volume^Porod	137	nm³

SASDEG3 – Paenibacillus xanthan lyase (PXL) at 20 °C

Sample:	Paenibacillus xanthan lyase monomer, 113 kDa Paenibacillus sp-62047 protein
Buffer:	20 mM Tris,, pH: 8.5
Experiment:	SAXS data collected at BM29, ESRF on 2016 Dec 15

R_g^Guinier	3.8	nm
D_max	13.8	nm
Volume^Porod	134	nm³

SASDD45 – Type II toxin-antitoxin system HicB family antitoxin - HicB protein

Type II toxin-antitoxin system HicB family antitoxin experimental SAS data

Sample:	Type II toxin-antitoxin system HicB family antitoxin tetramer, 63 kDa Burkholderia pseudomallei protein
Buffer:	25 mM Tris, 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2016 Jul 28

The molecular basis of protein toxin HicA-dependent binding of the protein antitoxin HicB to DNA. J Biol Chem (2018)
Winter AJ, Williams C, Isupov MN, Crocker H, Gromova M, Marsh P, Wilkinson OJ, Dillingham MS, Harmer NJ, Titball RW, Crump MP

R_g^Guinier	3.0	nm
D_max	10.5	nm
Volume^Porod	112	nm³

SASDD55 – Type II toxin-antitoxin system HicB family antitoxin - HicB protein - bound to addiction module toxin, HicA

Type II toxin-antitoxin system HicB family antitoxinAddiction module toxin, HicA experimental SAS data

Sample:	Type II toxin-antitoxin system HicB family antitoxin tetramer, 63 kDa Burkholderia pseudomallei protein Addiction module toxin, HicA monomer, 7 kDa Burkholderia pseudomallei protein
Buffer:	25 mM Tris, 150 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at B21, Diamond Light Source on 2016 Jul 27

R_g^Guinier	3.2	nm
D_max	11.0	nm
Volume^Porod	110	nm³

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