Browse by ORGANISM: other species

SASDYY3 – Influenza A virus Nuclear export protein NEP/NS2

Nuclear export protein experimental SAS data
DAMMIN model
Sample: Nuclear export protein monomer, 14 kDa Influenza A virus … protein
Buffer: 20 mM HEPES, 300 mM NaCl, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2020 Jul 9
Monomeric Structure of Influenza A Virus NEP/NS2 Obtained With an Artificial Protein Highlights Conformational Plasticity. J Mol Biol 437(24):169511 (2025)
Stelfox AJ, Bessonne M, Bourhis JM, Erba EB, Albanese P, Compte DP, Nevers Q, Urvoas A, Valerio-Lepiniec M, Minard P, Ruigrok RWH, Crépin T, Delmas B, Ballandras-Colas A
RgGuinier 1.9 nm
Dmax 6.0 nm
VolumePorod 24 nm3

SASDWG3 – MBP-tagged C-terminal domain of CpoS (Candidate inclusion membrane protein)

Candidate inclusion membrane protein (MBP-tagged) experimental SAS data
Candidate inclusion membrane protein (MBP-tagged) Kratky plot
Sample: Candidate inclusion membrane protein (MBP-tagged) tetramer, 235 kDa Chlamydia trachomatis serovar … protein
Buffer: 20 mM Tris-HCl, 50 mM NaCl, 1 mM EDTA, 2% glycerol, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2023 Feb 15
Tetramer formation of CpoS facilitates Inc-Inc interactions during Chlamydia trachomatis infection
Zhen Xu
RgGuinier 7.1 nm
Dmax 30.3 nm
VolumePorod 625 nm3

SASDX39 – Group IIC Intron Domain 1

Group IIC Intron Domain 1 experimental SAS data
DAMMIF model
Sample: Group IIC Intron Domain 1 monomer, 89 kDa Oceanobacillus iheyensis RNA
Buffer: 10 mM MgCl2, 5 mM Na-MES, pH: 6.5
Experiment: SAXS data collected at BM29, ESRF on 2021 Jul 7
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy. Nat Commun 16(1):10195 (2025)
Jadhav S, Maiorca M, Manigrasso J, Saha S, Rakitch A, Muscat S, Mulvaney T, De Vivo M, Topf M, Marcia M
RgGuinier 3.8 nm
Dmax 13.0 nm
VolumePorod 188 nm3

SASDX49 – Group IIC intron Domain 1, 2 & 3

Group IIC Intron Domain 1, 2 & 3 experimental SAS data
DAMMIF model
Sample: Group IIC Intron Domain 1, 2 & 3 monomer, 103 kDa Oceanobacillus iheyensis RNA
Buffer: 10 mM MgCl2, 5 mM Na-MES, pH: 6.5
Experiment: SAXS data collected at BM29, ESRF on 2021 Sep 2
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy. Nat Commun 16(1):10195 (2025)
Jadhav S, Maiorca M, Manigrasso J, Saha S, Rakitch A, Muscat S, Mulvaney T, De Vivo M, Topf M, Marcia M
RgGuinier 3.6 nm
Dmax 12.0 nm
VolumePorod 195 nm3

SASDX59 – Group IIC intron Domain 1 & 2

Group IIC Intron Domain 1 & 2 experimental SAS data
DAMMIF model
Sample: Group IIC Intron Domain 1 & 2 monomer, 96 kDa Oceanobacillus iheyensis RNA
Buffer: 10 mM MgCl2, 5 mM Na-MES, pH: 6.5
Experiment: SAXS data collected at BM29, ESRF on 2021 Sep 2
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy. Nat Commun 16(1):10195 (2025)
Jadhav S, Maiorca M, Manigrasso J, Saha S, Rakitch A, Muscat S, Mulvaney T, De Vivo M, Topf M, Marcia M
RgGuinier 3.6 nm
Dmax 11.0 nm
VolumePorod 179 nm3

SASDX69 – Group IIC intron Domain 1, 2. 3 & 4

Group IIC intron Domain 1, 2, 3 & 4 experimental SAS data
DAMMIF model
Sample: Group IIC intron Domain 1, 2, 3 & 4 monomer, 125 kDa Oceanobacillus iheyensis RNA
Buffer: 10 mM MgCl2, 5 mM Na-MES, pH: 6.5
Experiment: SAXS data collected at BM29, ESRF on 2021 Sep 2
Dynamic assembly of a large multidomain ribozyme visualized by cryo-electron microscopy. Nat Commun 16(1):10195 (2025)
Jadhav S, Maiorca M, Manigrasso J, Saha S, Rakitch A, Muscat S, Mulvaney T, De Vivo M, Topf M, Marcia M
RgGuinier 4.2 nm
Dmax 12.6 nm
VolumePorod 247 nm3

SASDWD7 – SEC-SAXS data of wildtype Melanotaenia fluviatilis apo estrogen receptor alpha ligand binding domain (LBD) at pH 7.5

Estrogen receptor alpha experimental SAS data
DAMMIF model
Sample: Estrogen receptor alpha dimer, 57 kDa Melanotaenia fluviatilis protein
Buffer: 20 mM Tris-HCl pH 7.5, 150 mM NaCl, 5% glycerol, 2 mM TCEP, pH: 7.5
Experiment: SAXS data collected at BioSAXS, Australian Synchrotron on 2024 Nov 9
A ternary switch model governing ERα ligand binding domain conformation. Nat Commun 16(1):10363 (2025)
McDougal DP, Pederick JL, Novick SJ, Jovcevski B, Warrender AK, Pascal BD, Griffin PR, Bruning JB
RgGuinier 2.5 nm
Dmax 9.2 nm
VolumePorod 72 nm3

SASDUW5 – C-terminal domain of Ubiquitinating/deubiquitinating enzyme SdeA (SdeA_CTD)

Ubiquitinating/deubiquitinating enzyme SdeA experimental SAS data
MONSA model
Sample: Ubiquitinating/deubiquitinating enzyme SdeA monomer, 39 kDa Legionella pneumophila subsp. … protein
Buffer: 25 mM Tris-HCl, 200 mM NaCl, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 4
Structural Basis for Membrane Targeting and Secretion of Legionella SidE Ubiquitin Ligases
Ahmed Mohammed
RgGuinier 3.9 nm
Dmax 15.7 nm
VolumePorod 62 nm3

SASDUX5 – Type 4 adaptor protein complex IcmS, IcmW and DotL (IcmS/IcmW/DotLc)

Type 4 adapter protein IcmSType 4 adapter protein IcmW (S9A)Type 4 coupling protein DotL experimental SAS data
MONSA model
Sample: Type 4 adapter protein IcmS monomer, 14 kDa Legionella pneumophila subsp. … protein
Type 4 adapter protein IcmW (S9A) monomer, 17 kDa Legionella pneumophila subsp. … protein
Type 4 coupling protein DotL monomer, 15 kDa Legionella pneumophila subsp. … protein
Buffer: 25 mM Tris-HCl, 200 mM NaCl, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 4
Structural Basis for Membrane Targeting and Secretion of Legionella SidE Ubiquitin Ligases
Ahmed Mohammed
RgGuinier 2.8 nm
Dmax 9.6 nm
VolumePorod 71 nm3

SASDUY5 – C-terminal domain of Ubiquitinating/deubiquitinating enzyme SdeA bound to Type 4 adaptor protein complex IcmS, IcmW and DotL (SdeACTD-IcmSWDotLc complex)

Ubiquitinating/deubiquitinating enzyme SdeAType 4 adapter protein IcmSType 4 adapter protein IcmW (S9A)Type 4 coupling protein DotL experimental SAS data
SREFLEX model
Sample: Ubiquitinating/deubiquitinating enzyme SdeA monomer, 39 kDa Legionella pneumophila subsp. … protein
Type 4 adapter protein IcmS monomer, 14 kDa Legionella pneumophila subsp. … protein
Type 4 adapter protein IcmW (S9A) monomer, 17 kDa Legionella pneumophila subsp. … protein
Type 4 coupling protein DotL monomer, 15 kDa Legionella pneumophila subsp. … protein
Buffer: 25 mM Tris-HCl, 200 mM NaCl, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Dec 4
Structural Basis for Membrane Targeting and Secretion of Legionella SidE Ubiquitin Ligases
Ahmed Mohammed
RgGuinier 3.8 nm
Dmax 14.4 nm
VolumePorod 166 nm3