Small Angle Scattering Biological Data Bank SASBDB

Browse by ORGANISM: other species

SASDQW7 – Bicelles formed by POPC POPG and cholate

Cholate - 3α,7α,12α-trihydroxy-5β-cholan-24-oic acidPOPC - 2-oleoyl-1-palmitoyl-sn-glyecro-3-phosphocholinePOPG - 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1′-rac-glycerol) experimental SAS data

Sample:	Cholate - 3α,7α,12α-trihydroxy-5β-cholan-24-oic acid None, lipid POPC - 2-oleoyl-1-palmitoyl-sn-glyecro-3-phosphocholine None, lipid POPG - 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1′-rac-glycerol) None, lipid
Buffer:	Tris buffered saline, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 17

Expanding the Toolbox for Bicelle-Forming Surfactant–Lipid Mixtures Molecules 27(21):7628 (2022)
Giudice R, Paracini N, Laursen T, Blanchet C, Roosen-Runge F, Cárdenas M

SASDQX7 – Bicelles formed by POPC POPG and DHPC

DHPC - 1,2-dihexanoyl-sn-glycero-3-phosphocholinePOPC - 2-oleoyl-1-palmitoyl-sn-glyecro-3-phosphocholinePOPG - 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1′-rac-glycerol) experimental SAS data

Sample:	DHPC - 1,2-dihexanoyl-sn-glycero-3-phosphocholine None, lipid POPC - 2-oleoyl-1-palmitoyl-sn-glyecro-3-phosphocholine None, lipid POPG - 1-palmitoyl-2-oleoyl-sn-glycero-3-phospho-(1′-rac-glycerol) None, lipid
Buffer:	Tris buffered saline, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Mar 17

Expanding the Toolbox for Bicelle-Forming Surfactant–Lipid Mixtures Molecules 27(21):7628 (2022)
Giudice R, Paracini N, Laursen T, Blanchet C, Roosen-Runge F, Cárdenas M

SASDP46 – Glycoside Hydrolase Family 5 endo-mannanase retrieved from Capybara gut metagenome

GH5 endo-mannanase from Capybara gut metagenome experimental SAS data

Sample:	GH5 endo-mannanase from Capybara gut metagenome monomer, 46 kDa metagenome protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at SAXS1 Beamline, Brazilian Synchrotron Light Laboratory on 2018 Oct 30

Glycoside hydrolase subfamily GH5_57 features a highly redesigned catalytic interface to process complex hetero-β-mannans. Acta Crystallogr D Struct Biol 78(Pt 11):1358-1372 (2022)
Martins MP, Morais MAB, Persinoti GF, Galinari RH, Yu L, Yoshimi Y, Passos Nunes FB, Lima TB, Barbieri SF, Silveira JLM, Lombard V, Terrapon N, Dupree P, Henrissat B, Murakami MT

R_g^Guinier	2.3	nm
D_max	5.5	nm
Volume^Porod	58	nm³

SASDQG6 – N-terminal truncation mutant of the periplasmic region of conjugal transfer mating pair stabilization protein TraG* from the R100 plasmid

Conjugal transfer mating pair stabilization protein TraG experimental SAS data

Sample:	Conjugal transfer mating pair stabilization protein TraG monomer, 52 kDa Shigella flexneri 4c protein
Buffer:	20 mM HEPES, 100 mM NaCl, 5% glycerol, pH: 7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Feb 23

Solution characterization of the dynamic conjugative entry exclusion protein TraG Structural Dynamics 9(6):064702 (2022)
Bragagnolo N, Audette G

R_g^Guinier	4.1	nm
D_max	17.5	nm
Volume^Porod	130	nm³

SASDQH6 – Periplasmic region of the conjugal transfer mating pair stabilization protein TraG* from the R100 plasmid

Sample:	Conjugal transfer mating pair stabilization protein TraG monomer, 57 kDa Shigella flexneri 4c protein
Buffer:	20 mM HEPES, 100 mM NaCl, 5% glycerol, 0.05% NP40, pH: 7
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Feb 23

Solution characterization of the dynamic conjugative entry exclusion protein TraG Structural Dynamics 9(6):064702 (2022)
Bragagnolo N, Audette G

R_g^Guinier	5.8	nm
D_max	45.0	nm

SASDQN5 – Candida glabrata Metacaspase in 10 mM CaCl2

Sample:	Metacaspase-1 monomer, 46 kDa Candida glabrata (strain … protein
Buffer:	10 mM HEPES, 150 mM NaCl, 1% glycerol, 10 mM CaCl2, pH: 7.6
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Sep 26

Structural and molecular determinants of Candida glabrata metacaspase maturation and activation by calcium. Commun Biol 5(1):1158 (2022)
Conchou L, Doumèche B, Galisson F, Violot S, Dugelay C, Diesis E, Page A, Bienvenu AL, Picot S, Aghajari N, Ballut L

R_g^Guinier	1.9	nm
D_max	5.4	nm
Volume^Porod	43	nm³

SASDQP5 – Phosphoprotein of Borna disease virus

Phosphoprotein of Borna disease virus Rg histogram

Sample:	Phosphoprotein tetramer, 90 kDa Borna disease virus … protein
Buffer:	20 mM HEPES, 150 mM NaCl, 5 mM β- mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Sep 1

Borna Disease Virus 1 Phosphoprotein Forms a Tetramer and Interacts with Host Factors Involved in DNA Double-Strand Break Repair and mRNA Processing. Viruses 14(11) (2022)
Tarbouriech N, Chenavier F, Kawasaki J, Bachiri K, Bourhis JM, Legrand P, Freslon LL, Laurent EMN, Suberbielle E, Ruigrok RWH, Tomonaga K, Gonzalez-Dunia D, Horie M, Coyaud E, Crépin T

R_g^Guinier	6.1	nm
D_max	21.5	nm
Volume^Porod	225	nm³

SASDQQ5 – Oligomerisation domain of phosphoprotein from Borna disease virus

Sample:	Phosphoprotein tetramer, 47 kDa Borna disease virus … protein
Buffer:	20 mM HEPES, 150 mM NaCl, 5 mM β- mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Sep 1

R_g^Guinier	4.5	nm
D_max	17.0	nm
Volume^Porod	66	nm³

SASDQR5 – Oligomerisation domain of phosphoprotein from Munia bornavirus

Phosphoprotein oligomerisation domain experimental SAS data

Sample:	Phosphoprotein oligomerisation domain tetramer, 50 kDa protein
Buffer:	20 mM HEPES, 150 mM NaCl, 5 mM β- mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Sep 1

R_g^Guinier	4.6	nm
D_max	17.8	nm
Volume^Porod	70	nm³

SASDQS5 – Oligomerisation domain of phosphoprotein from Gaboon viper virus

Sample:	Phosphoprotein tetramer, 52 kDa Gaboon viper virus … protein
Buffer:	20 mM HEPES, 150 mM NaCl, 5 mM β- mercaptoethanol, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Sep 1

R_g^Guinier	4.6	nm
D_max	17.5	nm
Volume^Porod	75	nm³

First << Prev Page 64 of 203 Next >> Last