Small Angle Scattering Biological Data Bank SASBDB

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SASDNH5 – Desulfofustis sp. PB-SRB1 ligand-gated ion channel without calcium measured by paused-flow SEC-SANS

Neurotransmitter-gated ion-channel ligand-binding domain-containing protein experimental SAS data

Neurotransmitter-gated ion-channel ligand-binding domain-containing protein Kratky plot

Sample:	Neurotransmitter-gated ion-channel ligand-binding domain-containing protein pentamer, 342 kDa Desulfofustis sp. PB-SRB1 protein
Buffer:	20 mM Tris, 150 mM NaCl, 10 mM EDTA, 0.5 mM deuterated n-Dodecyl-B-D-Maltoside, in D2O, pH: 7.5
Experiment:	SANS data collected at D22, Institut Laue-Langevin (ILL) on 2020 Aug 23

Biophysical characterization of calcium-binding and modulatory-domain dynamics in a pentameric ligand-gated ion channel. Proc Natl Acad Sci U S A 119(50):e2210669119 (2022)
Lycksell M, Rovšnik U, Hanke A, Martel A, Howard RJ, Lindahl E

R_g^Guinier	5.2	nm
D_max	16.7	nm
Volume^Porod	540	nm³

SASDLS8 – Complex of Mtb GntR and Aptamer 1 [Rv0792c and Rv0792c_1]

Complex of Rv0792c and Rv0792c_1 experimental SAS data

Sample:	Complex of Rv0792c and Rv0792c_1 monomer, 74 kDa
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 31

Structural and Functional Characterization of Rv0792c from Mycobacterium tuberculosis: Identifying Small Molecule Inhibitor against HutC Protein. Microbiol Spectr :e0197322 (2022)
Chauhan NK, Anand A, Sharma A, Dhiman K, Gosain TP, Singh P, Singh P, Khan E, Chattopadhyay G, Kumar A, Sharma D, Ashish, Sharma TK, Singh R

R_g^Guinier	3.6	nm
D_max	12.0	nm

SASDLT8 – Complex of Mtb GntR and Aptamer 2 [Rv0792c and Rv0792c_2]

Complex of Rv0792c and Rv0792c_2 experimental SAS data

Sample:	Complex of Rv0792c and Rv0792c_2 monomer, 46 kDa
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 31

R_g^Guinier	3.1	nm
D_max	9.8	nm

SASDLU8 – Complex of Mtb GntR and Aptamer 5 [Rv0792c and Rv0792c_5]

Complex of GntR protein: Aptamer5 experimental SAS data

Sample:	Complex of GntR protein: Aptamer5 monomer, 78 kDa
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 31

R_g^Guinier	3.4	nm
D_max	12.0	nm

SASDLV8 – SS DNA Aptamer 5 which binds Mtb GntR Homolog [Rv0792c_5]

SSDNA Aptamer from SELEX against Mtb Rv0792c experimental SAS data

Sample:	SSDNA Aptamer from SELEX against Mtb Rv0792c monomer, 14 kDa unidentified DNA
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 21

R_g^Guinier	1.8	nm
D_max	7.1	nm

SASDLW8 – SS DNA Aptamer 2 which binds Mtb GntR Homolog [Rv0792c_2]

Sample:	SSDNA Aptamer from SELEX against Mtb Rv0792c monomer, 13 kDa unidentified DNA
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 20

R_g^Guinier	1.9	nm
D_max	7.6	nm

SASDLX8 – SS DNA Aptamer 1 which binds Mtb GntR Homolog [Rv0792c_1]

Sample:	SSDNA Aptamer from SELEX against Mtb Rv0792c monomer, 13 kDa unidentified DNA
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 20

R_g^Guinier	2.1	nm
D_max	8.6	nm

SASDLZ8 – SS DNA Aptamer 1 which binds Mtb GntR Homolog [Rv0792c_1]

Sample:	SSDNA Aptamer from SELEX against Mtb Rv0792c monomer, 13 kDa unidentified DNA
Buffer:	25 mM HEPES Buffer; 400 mM NaCl,, pH: 7.2
Experiment:	SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2019 Oct 20

R_g^Guinier	2.1	nm
D_max	8.6	nm

SASDMA9 – Diacetylchitobiose deacetylase (isolated hexamer from SEC-SAXS)

Diacetylchitobiose deacetylase experimental SAS data

Sample:	Diacetylchitobiose deacetylase hexamer, 186 kDa Thermococcus chitonophagus protein
Buffer:	20 mM TRIS, 200 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Sep 26

Structural, Thermodynamic and Enzymatic Characterization of N,N-Diacetylchitobiose Deacetylase from Pyrococcus chitonophagus. Int J Mol Sci 23(24) (2022)
Biniek-Antosiak K, Bejger M, Śliwiak J, Baranowski D, Mohammed ASA, Svergun DI, Rypniewski W

R_g^Guinier	3.6	nm
D_max	11.2	nm
Volume^Porod	317	nm³

SASDMB9 – Diacetylchitobiose deacetylase (oligomeric mixture of hexamers and dodecamers)

Sample:	Diacetylchitobiose deacetylase, 185 kDa Thermococcus chitonophagus protein
Buffer:	20 mM TRIS, 200 mM NaCl, pH: 7.4
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2021 Sep 26

R_g^Guinier

3.9

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