SASBDB entries for UniProt ID:

SASDV74 – Ser48-phosphorylated N-terminal domain of transactive response DNA-binding protein 43 (TDP-43)

UniProt ID: Q13148 (1-80) TAR DNA-binding protein 43
TAR DNA-binding protein 43 experimental SAS data
OTHER model
Sample: TAR DNA-binding protein 43 monomer, 9 kDa Homo sapiens protein
Buffer: 50 mM Tris-HCl, 150 mM NaCl, 1 mM DTT, 3% glycerol, pH: 8.5
Experiment: SAXS data collected at BL38B1, SPring-8 on 2024 May 29
Semi-synthesis of TDP-43 reveals the effects of phosphorylation in N-terminal domain on self-association Communications Chemistry 8(1) (2025)
Sasaki D, Tenda M, Sohma Y
RgGuinier 1.4 nm
Dmax 4.3 nm
VolumePorod 15 nm3

SASDVR4 – Endophilin B1 wild type (0.69 mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 dimer, 82 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 5.1 nm
Dmax 16.0 nm
VolumePorod 151 nm3

SASDVS4 – Endophilin B1 wild type (0.34mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 dimer, 82 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 5.0 nm
Dmax 16.0 nm
VolumePorod 152 nm3

SASDVT4 – Endophilin B1 wild type (0.14 mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 monomer, 41 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 3.7 nm
Dmax 15.3 nm
VolumePorod 47 nm3

SASDVU4 – Endophilin B1 truncated construction without SH3 domain

UniProt ID: Q9Y371 (1-306) Endophilin-B1 (Δ307-360)
Endophilin-B1 (Δ307-360) experimental SAS data
Sample: Endophilin-B1 (Δ307-360) dimer, 68 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 4.6 nm
Dmax 15.2 nm
VolumePorod 149 nm3

SASDV55 – The dark-adapted AsLOV2 domain (Avena sativa, Oat)

UniProt ID: O49003 (404-546) non-specific serine/threonine protein kinase
non-specific serine/threonine protein kinase experimental SAS data
non-specific serine/threonine protein kinase Kratky plot
Sample: Non-specific serine/threonine protein kinase monomer, 17 kDa Avena sativa protein
Buffer: 20 mM Tris, 200 mM NaCl, pH: 7
Experiment: SAXS data collected at 4C, Pohang Accelerator Laboratory on 2021 May 15
Structural dynamics of protein-protein association involved in the light-induced transition of Avena sativa LOV2 protein. Nat Commun 15(1):6991 (2024)
Kim C, Yun SR, Lee SJ, Kim SO, Lee H, Choi J, Kim JG, Kim TW, You S, Kosheleva I, Noh T, Baek J, Ihee H
RgGuinier 1.8 nm
Dmax 6.6 nm
VolumePorod 21 nm3

SASDV65 – The light-adapted AsLOV2 domain (Avena sativa, Oat)

UniProt ID: O49003 (404-546) non-specific serine/threonine protein kinase
non-specific serine/threonine protein kinase experimental SAS data
non-specific serine/threonine protein kinase Kratky plot
Sample: Non-specific serine/threonine protein kinase dimer, 33 kDa Avena sativa protein
Buffer: 20 mM Tris, 200 mM NaCl, pH: 7
Experiment: SAXS data collected at 4C, Pohang Accelerator Laboratory on 2021 May 15
Structural dynamics of protein-protein association involved in the light-induced transition of Avena sativa LOV2 protein. Nat Commun 15(1):6991 (2024)
Kim C, Yun SR, Lee SJ, Kim SO, Lee H, Choi J, Kim JG, Kim TW, You S, Kosheleva I, Noh T, Baek J, Ihee H
RgGuinier 2.3 nm
Dmax 8.5 nm
VolumePorod 51 nm3

SASDV75 – S9 carboxypeptidase from Bacillus subtilis (4 mg/ml)

UniProt ID: E0U0N4 (2-657) Putative acylaminoacyl-peptidase
Putative acylaminoacyl-peptidase experimental SAS data
GASBOR model
Sample: Putative acylaminoacyl-peptidase tetramer, 293 kDa Bacillus spizizenii (strain … protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 18
Structural adaptations for carboxypeptidase activity in putative S9 acylaminoacyl peptidase from Bacillus subtilis. Int J Biol Macromol :136734 (2024)
Chandravanshi K, Singh R, Kumar A, Bhange GN, Kumar A, Makde RD
RgGuinier 5.2 nm
Dmax 15.9 nm
VolumePorod 439 nm3

SASDV85 – S9 carboxypeptidase from Bacillus subtilis (6 mg/ml)

UniProt ID: E0U0N4 (2-657) Putative acylaminoacyl-peptidase
Putative acylaminoacyl-peptidase experimental SAS data
GASBOR model
Sample: Putative acylaminoacyl-peptidase tetramer, 293 kDa Bacillus spizizenii (strain … protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 18
Structural adaptations for carboxypeptidase activity in putative S9 acylaminoacyl peptidase from Bacillus subtilis. Int J Biol Macromol :136734 (2024)
Chandravanshi K, Singh R, Kumar A, Bhange GN, Kumar A, Makde RD
RgGuinier 5.2 nm
Dmax 14.7 nm
VolumePorod 435 nm3

SASDV95 – S9 carboxypeptidase from Bacillus subtilis (8 mg/ml)

UniProt ID: E0U0N4 (2-657) Putative acylaminoacyl-peptidase
Putative acylaminoacyl-peptidase experimental SAS data
GASBOR model
Sample: Putative acylaminoacyl-peptidase tetramer, 293 kDa Bacillus spizizenii (strain … protein
Buffer: 10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment: SAXS data collected at BL-18, INDUS-2 on 2024 Mar 18
Structural adaptations for carboxypeptidase activity in putative S9 acylaminoacyl peptidase from Bacillus subtilis. Int J Biol Macromol :136734 (2024)
Chandravanshi K, Singh R, Kumar A, Bhange GN, Kumar A, Makde RD
RgGuinier 5.2 nm
Dmax 15.3 nm
VolumePorod 446 nm3