SASBDB entries for UniProt ID:

SASDV54 – YdaS, a cro-type repressor from Escherichai coli O157:H7 cryptic prophage CP-933 bound to a 22 base pair dsDNA.

UniProt ID: Q8XAD7 (1-100) Phage antirepressor protein Cro

UniProt ID: None (None-None) IR1 22 base pair dsDNA
Phage antirepressor protein CroIR1 22 base pair dsDNA experimental SAS data
OTHER [STATIC IMAGE] model
Sample: Phage antirepressor protein Cro dimer, 24 kDa Escherichia coli O157:H7 protein
IR1 22 base pair dsDNA monomer, 14 kDa DNA
Buffer: 20 mM sodium acetate, 150 mM NaCl, 1 mM TCEP, pH: 5.5
Experiment: SAXS data collected at BM29, ESRF on 2021 Apr 13
Structural-function relationship of YdaS, a Cro-type repressor in the cryptic prophage CP-933P from Escherichia coli O157:H7
Marusa Prolic Kalinsek
RgGuinier 2.8 nm
Dmax 10.1 nm
VolumePorod 53 nm3

SASDV64 – Serine hydrolase FphH with short chain esterase activity (Apo FphH)

UniProt ID: A0A0D6HZA6 (1-246) Alpha/beta fold hydrolase
Alpha/beta fold hydrolase experimental SAS data
DAMFILT model
Sample: Alpha/beta fold hydrolase monomer, 28 kDa Staphylococcus aureus protein
Buffer: 100 mM NaCl, 10 mM HEPES, pH: 7.6
Experiment: SAXS data collected at BioSAXS, Australian Synchrotron on 2024 Apr 11
Similar but Distinct—Biochemical Characterization of the Staphylococcus aureus Serine Hydrolases FphH  and FphI Proteins: Structure, Function, and Bioinformatics (2024)
Fellner M, Randall G, Bitac I, Warrender A, Sethi A, Jelinek R, Kass I
RgGuinier 2.1 nm
Dmax 6.5 nm
VolumePorod 41 nm3

SASDV74 – Ser48-phosphorylated N-terminal domain of transactive response DNA-binding protein 43 (TDP-43)

UniProt ID: Q13148 (1-80) TAR DNA-binding protein 43
TAR DNA-binding protein 43 experimental SAS data
OTHER model
Sample: TAR DNA-binding protein 43 monomer, 9 kDa Homo sapiens protein
Buffer: 50 mM Tris-HCl, 150 mM NaCl, 1 mM DTT, 3% glycerol, pH: 8.5
Experiment: SAXS data collected at BL38B1, SPring-8 on 2024 May 29
Semi-synthesis of TDP-43 reveals the effects of phosphorylation in N-terminal domain on self-association Communications Chemistry 8(1) (2025)
Sasaki D, Tenda M, Sohma Y
RgGuinier 1.4 nm
Dmax 4.3 nm
VolumePorod 15 nm3

SASDVC4 – Shwachman-Bodian-Diamond syndrome protein (SBDS) - wild type

UniProt ID: Q9Y3A5 (1-250) Ribosome maturation protein SBDS
Ribosome maturation protein SBDS experimental SAS data
MULTIFOXS model
Sample: Ribosome maturation protein SBDS monomer, 29 kDa Homo sapiens protein
Buffer: 50 mM Tris pH 8.0, 10% glycerol, 300 mM NaCl, 5 mM MgCl2., pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Apr 6
Structural Implications of Missense Point Mutations in Shwachman–Bodian–Diamond Syndrome Protein (SBDS): A Combined SAXS/MD Investigation ACS Omega (2025)
Mattiotti G, Nanna V, Giulini M, Alberga D, Mangiatordi G, Sánchez-Puig N, Saviano M, Tubiana L, Potestio R, Lattanzi G, Siliqi D
RgGuinier 3.0 nm
Dmax 11.4 nm
VolumePorod 50 nm3

SASDVD4 – Shwachman-Bodian-Diamond syndrome protein (SBDS) - R19Q mutant

UniProt ID: Q9Y3A5 (1-250) Ribosome maturation protein SBDS (R19Q)
Ribosome maturation protein SBDS (R19Q) experimental SAS data
MULTIFOXS model
Sample: Ribosome maturation protein SBDS (R19Q) monomer, 29 kDa Homo sapiens protein
Buffer: 50 mM Tris pH 8.0, 10% glycerol, 300 mM NaCl, 5 mM MgCl2., pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Apr 6
Structural Implications of Missense Point Mutations in Shwachman–Bodian–Diamond Syndrome Protein (SBDS): A Combined SAXS/MD Investigation ACS Omega (2025)
Mattiotti G, Nanna V, Giulini M, Alberga D, Mangiatordi G, Sánchez-Puig N, Saviano M, Tubiana L, Potestio R, Lattanzi G, Siliqi D
RgGuinier 2.9 nm
Dmax 12.2 nm
VolumePorod 46 nm3

SASDVE4 – Shwachman-Bodian-Diamond syndrome protein (SBDS) - I167T mutant

UniProt ID: Q9Y3A5 (1-250) Ribosome maturation protein SBDS (I167T)
Ribosome maturation protein SBDS (I167T) experimental SAS data
MULTIFOXS model
Sample: Ribosome maturation protein SBDS (I167T) monomer, 29 kDa Homo sapiens protein
Buffer: 50 mM Tris pH 8.0, 10% glycerol, 300 mM NaCl, 5 mM MgCl2., pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Apr 6
Structural Implications of Missense Point Mutations in Shwachman–Bodian–Diamond Syndrome Protein (SBDS): A Combined SAXS/MD Investigation ACS Omega (2025)
Mattiotti G, Nanna V, Giulini M, Alberga D, Mangiatordi G, Sánchez-Puig N, Saviano M, Tubiana L, Potestio R, Lattanzi G, Siliqi D
RgGuinier 2.9 nm
Dmax 10.5 nm
VolumePorod 44 nm3

SASDVF4 – Shwachman-Bodian-Diamond syndrome protein (SBDS) - R175W mutant

UniProt ID: Q9Y3A5 (1-250) Ribosome maturation protein SBDS (R175W)
Ribosome maturation protein SBDS (R175W) experimental SAS data
MULTIFOXS model
Sample: Ribosome maturation protein SBDS (R175W) monomer, 29 kDa Homo sapiens protein
Buffer: 50 mM Tris pH 8.0, 10% glycerol, 300 mM NaCl, 5 mM MgCl2., pH:
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Apr 6
Structural Implications of Missense Point Mutations in Shwachman–Bodian–Diamond Syndrome Protein (SBDS): A Combined SAXS/MD Investigation ACS Omega (2025)
Mattiotti G, Nanna V, Giulini M, Alberga D, Mangiatordi G, Sánchez-Puig N, Saviano M, Tubiana L, Potestio R, Lattanzi G, Siliqi D
RgGuinier 3.1 nm
Dmax 11.6 nm
VolumePorod 48 nm3

SASDVR4 – Endophilin B1 wild type (0.69 mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 dimer, 82 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 5.1 nm
Dmax 16.0 nm
VolumePorod 151 nm3

SASDVS4 – Endophilin B1 wild type (0.34mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 dimer, 82 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 5.0 nm
Dmax 16.0 nm
VolumePorod 152 nm3

SASDVT4 – Endophilin B1 wild type (0.14 mg/ml)

UniProt ID: Q9Y371 (1-365) Endophilin-B1
Endophilin-B1 experimental SAS data
Sample: Endophilin-B1 monomer, 41 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 0.5 mM DTT, pH: 8.1
Experiment: SAXS data collected at BM29, ESRF on 2024 Mar 10
Peripheral membrane protein endophilin B1 probes, perturbs and permeabilizes lipid bilayers Communications Biology 8(1) (2025)
Thorlacius A, Rulev M, Sundberg O, Sundborger-Lunna A
RgGuinier 3.7 nm
Dmax 15.3 nm
VolumePorod 47 nm3