SASBDB entries for UniProt ID:

SASDXY7 – N-Myc proto-oncogene residues 1-100 in complex with Aurora kinase A mutant C290A:C393A

UniProt ID: P04198 (1-100) N-myc proto-oncogene protein, residues 1-100

UniProt ID: O14965 (122-403) Aurora kinase A mutant C290A:C393A
N-myc proto-oncogene protein, residues 1-100Aurora kinase A mutant C290A:C393A experimental SAS data
N-myc proto-oncogene protein, residues 1-100 Aurora kinase A mutant C290A:C393A Kratky plot
Sample: N-myc proto-oncogene protein, residues 1-100 monomer, 11 kDa Homo sapiens protein
Aurora kinase A mutant C290A:C393A monomer, 33 kDa Homo sapiens protein
Buffer: 20mM HEPES, 150mM NaCl, 5mM MgCl2, 3% v/v glycerol, 2mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Dec 9
The N-Myc MB0-MBI region interacts specifically and dynamically with the N-lobe of Aurora kinase A. Nat Commun (2026)
Hultman J, Morad V, Tanner E, Kenney TMG, Pietras Z, Khare LP, Derbyshire D, Resetca D, Arrowsmith CH, Aili D, Ekström S, Penn LZ, Wallner B, Ahlner A, Sunnerhagen M
RgGuinier 2.8 nm
Dmax 11.4 nm
VolumePorod 82 nm3

SASDXZ7 – SmThrRS model for open state based on PDB entry 6vu9

UniProt ID: B2FN79 (None-None) Stenotrophomonas maltophilia threonyl tRNA synthetase
Stenotrophomonas maltophilia threonyl tRNA synthetase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Stenotrophomonas maltophilia threonyl tRNA synthetase dimer, 146 kDa Stenotrophomonas maltophilia (strain … protein
Buffer: 20 mM HEPES, 0.2 M NaCl, 1.5% v/v glycerol, and 1 mM TCEP, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2024 Nov 7
Crystal structure of a complete threonyl tRNA synthetase: toggle clamp model? Biochemical and Biophysical Research Communications :152677 (2025)
Tran T, Fenwick M, Edwards T, Dranow D, Abendroth J, Shek R, Tillery L, Craig J, Van Voorhis W, Myler P
RgGuinier 4.2 nm
Dmax 16.2 nm

SASDX28 – SmThrRS model for closed state based on PDB entry 1qf6

UniProt ID: B2FN79 (None-None) Stenotrophomonas maltophilia threonyl tRNA synthetase
Stenotrophomonas maltophilia threonyl tRNA synthetase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Stenotrophomonas maltophilia threonyl tRNA synthetase dimer, 146 kDa Stenotrophomonas maltophilia (strain … protein
Buffer: 20 mM HEPES, 0.2 M NaCl, 1.5% v/v glycerol, and 1 mM TCEP, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2024 Nov 7
Crystal structure of a complete threonyl tRNA synthetase: toggle clamp model? Biochemical and Biophysical Research Communications :152677 (2025)
Tran T, Fenwick M, Edwards T, Dranow D, Abendroth J, Shek R, Tillery L, Craig J, Van Voorhis W, Myler P
RgGuinier 4.2 nm
Dmax 16.2 nm

SASDX38 – SmThrRS model for closed state based on PDB entry 1nyr

UniProt ID: B2FN79 (None-None) Stenotrophomonas maltophilia threonyl tRNA synthetase
Stenotrophomonas maltophilia threonyl tRNA synthetase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Stenotrophomonas maltophilia threonyl tRNA synthetase dimer, 146 kDa Stenotrophomonas maltophilia (strain … protein
Buffer: 20 mM HEPES, 0.2 M NaCl, 1.5% v/v glycerol, and 1 mM TCEP, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2024 Nov 7
Crystal structure of a complete threonyl tRNA synthetase: toggle clamp model? Biochemical and Biophysical Research Communications :152677 (2025)
Tran T, Fenwick M, Edwards T, Dranow D, Abendroth J, Shek R, Tillery L, Craig J, Van Voorhis W, Myler P
RgGuinier 4.2 nm
Dmax 16.2 nm

SASDX48 – SmThrRS model based on PDB entries 6vu9 and 1qf6

UniProt ID: B2FN79 (None-None) Stenotrophomonas maltophilia threonyl tRNA synthetase
Stenotrophomonas maltophilia threonyl tRNA synthetase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Stenotrophomonas maltophilia threonyl tRNA synthetase dimer, 146 kDa protein
Buffer: 20 mM HEPES, 0.2 M NaCl, 1.5% v/v glycerol, and 1 mM TCEP, pH: 7
Experiment: SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2024 Nov 7
Crystal structure of a complete threonyl tRNA synthetase: toggle clamp model? Biochemical and Biophysical Research Communications :152677 (2025)
Tran T, Fenwick M, Edwards T, Dranow D, Abendroth J, Shek R, Tillery L, Craig J, Van Voorhis W, Myler P
RgGuinier 4.2 nm

SASDXL8 – A nuclear mRNA-binding protein bound to GT-repeat DNA Oligo: TDP-43 (TAR DNA-binding protein 43)

UniProt ID: Q13148 (1-277) TAR DNA-binding protein 43
TAR DNA-binding protein 43 experimental SAS data
TAR DNA-binding protein 43 Kratky plot
Sample: TAR DNA-binding protein 43 monomer, 63 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 100 mM KCl, 2 mM TCEP, pH: 7.6
Experiment: SAXS data collected at SWING, SOLEIL on 2022 Nov 30
From TDP-43/RNA complex formation to disease-linked TDP-43 aggregation through a structural and cellular approach. Nat Commun (2026)
Feng Y, Joshi V, Pankivskyi S, Clément MJ, Rengifo-Gonzalez JC, Thureau A, Pastré D, Bouhss A
RgGuinier 4.0 nm
Dmax 16.5 nm
VolumePorod 135 nm3

SASDXM8 – Disordered repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase

UniProt ID: P0DKX7 (1529-1680) Repeats-in-toxin domain Block V of adenylate cyclase toxin
Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Apr 1
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.7 nm
Dmax 15.4 nm
VolumePorod 52 nm3

SASDXN8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 1 mM CaCl2

UniProt ID: P0DKX7 (1529-1680) Repeats-in-toxin domain Block V of adenylate cyclase toxin
Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 1 mM CaCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Jun 28
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 2.0 nm
Dmax 8.1 nm
VolumePorod 38 nm3

SASDXP8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 10 mM KCl

UniProt ID: P0DKX7 (1529-1680) Repeats-in-toxin domain Block V of adenylate cyclase toxin
Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Repeats-in-toxin domain Block V of adenylate cyclase toxin Kratky plot
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 10 mM KCl, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Dec 12
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.7 nm
Dmax 15.6 nm
VolumePorod 50 nm3

SASDXQ8 – Repeats-in-toxin domain Block V of Bifunctional hemolysin/adenylate cyclase, 1 mM MgCl2

UniProt ID: P0DKX7 (1529-1680) Repeats-in-toxin domain Block V of adenylate cyclase toxin
Repeats-in-toxin domain Block V of adenylate cyclase toxin experimental SAS data
Sample: Repeats-in-toxin domain Block V of adenylate cyclase toxin monomer, 19 kDa Bordetella pertussis protein
Buffer: 50 mM Tris, 5 mM DTT, 1 mM MgCl2, pH: 7.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2024 Jun 28
Ion-selective conformational stabilization of a disordered repeats-in-toxin protein domain. Biophys J (2025)
Gudinas AP, Shambharkar GM, Chang MP, Fernández D, Matsui T, Mai DJ
RgGuinier 3.5 nm
Dmax 14.9 nm
VolumePorod 49 nm3