Curated repository for small angle scattering data and models


SASBDB currently contains:


5602

experimental data sets

6693

models
550 experimental data sets on hold
874 models on hold

Small angle scattering (SAS) of X-ray and neutrons provides structural information on biological macromolecules in solution at a resolution of 1-2 nm.
SASBDB is a fully searchable curated repository of freely accessible and downloadable experimental data, which are deposited together with the relevant experimental conditions, sample details, derived models and their fits to the data.

Recent depositions:

SASDV94 – Phospholipase C (PLC H) bound to the chaperone PLC R2 (PLC H/R2 complex)

phospholipase CPhospholipase C accessory protein PlcR experimental SAS data
ALPHAFOLD model
Sample: Phospholipase C monomer, 84 kDa Pseudomonas aeruginosa (strain … protein
Phospholipase C accessory protein PlcR monomer, 19 kDa Pseudomonas sp. FDAARGOS_761 protein
Buffer: 25 mM Tris pH 7.5, 100 mM NaCl, 3 mM β-mercaptoethanol, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2022 Dec 16
Molecular virulence mechanism of phospholipase C from Pseudomonas aeruginosa Protein & Cell (2026)
Sabharwal N, Ge Y, Lunelli M, Sae-Ueng U, Jeffries C, Chatziefthymiou S, Srivastava S, Tumeh A, Geisler A, Kolbe M, Labahn J
RgGuinier 3.1 nm
Dmax 12.0 nm
VolumePorod 156 nm3

Browse the contents according to:

Organism
Macromolecule type
Model type
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To cite SASBDB refer to: Kikhney AG, Borges CR, Molodenskiy DS, Jeffries CM, Svergun DI (2020) SASBDB: Towards an automatically curated and validated repository for biological scattering data. Protein Science 29(1); 66-75.