Browse by ORGANISM: Homo sapiens (Human)

SASDUD3 – Phosphorylated E3 ubiquitin-protein ligase Nedd4-2 in the presence of calcium

Isoform 5 of E3 ubiquitin-protein ligase NEDD4-like experimental SAS data
Isoform 5 of E3 ubiquitin-protein ligase NEDD4-like Kratky plot
Sample: Isoform 5 of E3 ubiquitin-protein ligase NEDD4-like monomer, 110 kDa Homo sapiens protein
Buffer: 20 mM HEPES, 150 mM NaCl, 1 mM TCEP, 1 mM CaCl2, 3% glycerol, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Aug 17
Structural basis of ubiquitin ligase Nedd4-2 autoinhibition and regulation by calcium and 14-3-3 proteins Nature Communications 16(1) (2025)
Janosev M, Kosek D, Tekel A, Joshi R, Honzejkova K, Pohl P, Obsil T, Obsilova V
RgGuinier 4.9 nm
Dmax 22.5 nm
VolumePorod 201 nm3

SASDSL2 – Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (EMAPII) at pH 8

Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 experimental SAS data
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (EMAPII) at pH 8 Rg histogram
Sample: Aminoacyl tRNA synthase complex-interacting multifunctional protein 1 monomer, 20 kDa Homo sapiens protein
Buffer: 50 mM Tris, 150 mM NaCl, 1mM DTT, pH: 8
Experiment: SAXS data collected at Xenocs Xeuss 2.0 with MetalJet, Department of Macromolecular Physics, Faculty of Physics, Adam Mickiewicz University on 2022 Oct 12
Solution structure of the EMAPII domain of human aminoacyl-tRNA synthetase complex
Michal Taube
RgGuinier 1.9 nm
Dmax 7.7 nm
VolumePorod 27 nm3

SASDWR3 – BC120 G25C RNA

BC120 G25C RNA experimental SAS data
DAMMIN model
Sample: BC120 G25C RNA monomer, 39 kDa Homo sapiens RNA
Buffer: phosphate buffered saline, pH: 7.4
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Sep 22
Alu RNA pseudoknot alterations influence SRP9/SRP14 association. RNA (2025)
Gussakovsky D, Brown MJF, Pereira HS, Meier M, Padilla-Meier GP, Black NA, Booy EP, Stetefeld J, Patel TR, McKenna SA
RgGuinier 4.1 nm
Dmax 13.8 nm
VolumePorod 63 nm3

SASDW74 – Aromatic-L-amino-acid decarboxylase L353P bound to pyridoxal 5'-phosphate (PLP)

Aromatic-L-amino-acid decarboxylase (L353P) experimental SAS data
DAMMIN model
Sample: Aromatic-L-amino-acid decarboxylase (L353P) dimer, 107 kDa Homo sapiens protein
Buffer: 50 mM HEPES, pH: 7.4
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Jul 7
The CRISPR-Cas9 knockout DDC SH-SY5Y in vitro model for AADC deficiency provides insight into the pathogenicity of R347Q and L353P variants: a cross-sectional structural and functional analysis. FEBS J (2025)
Carmona-Carmona CA, Bisello G, Franchini R, Lunardi G, Galavotti R, Perduca M, Ribeiro RP, Belviso BD, Giorgetti A, Caliandro R, Lievens PM, Bertoldi M
RgGuinier 3.1 nm
Dmax 8.8 nm
VolumePorod 152 nm3

SASDW84 – Aromatic-L-amino-acid decarboxylase R347Q bound to pyridoxal 5'-phosphate (PLP)

Aromatic-L-amino-acid decarboxylase (R347Q) experimental SAS data
DAMMIN model
Sample: Aromatic-L-amino-acid decarboxylase (R347Q) dimer, 108 kDa Homo sapiens protein
Buffer: 50 mM HEPES, 100 µM pyridoxal 5'-phosphate, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2021 Jul 7
The CRISPR-Cas9 knockout DDC SH-SY5Y in vitro model for AADC deficiency provides insight into the pathogenicity of R347Q and L353P variants: a cross-sectional structural and functional analysis. FEBS J (2025)
Carmona-Carmona CA, Bisello G, Franchini R, Lunardi G, Galavotti R, Perduca M, Ribeiro RP, Belviso BD, Giorgetti A, Caliandro R, Lievens PM, Bertoldi M
RgGuinier 3.6 nm
Dmax 14.2 nm
VolumePorod 220 nm3

SASDV74 – Ser48-phosphorylated N-terminal domain of transactive response DNA-binding protein 43 (TDP-43)

TAR DNA-binding protein 43 experimental SAS data
OTHER model
Sample: TAR DNA-binding protein 43 monomer, 9 kDa Homo sapiens protein
Buffer: 50 mM Tris-HCl, 150 mM NaCl, 1 mM DTT, 3% glycerol, pH: 8.5
Experiment: SAXS data collected at BL38B1, SPring-8 on 2024 May 29
Semi-synthesis of TDP-43 reveals the effects of phosphorylation in N-terminal domain on self-association Communications Chemistry 8(1) (2025)
Sasaki D, Tenda M, Sohma Y
RgGuinier 1.4 nm
Dmax 4.3 nm
VolumePorod 15 nm3

SASDXW3 – Transthyretin tetramer

Transthyretin experimental SAS data
COOT model
Sample: Transthyretin tetramer, 55 kDa Homo sapiens protein
Buffer: 20 mM Tris, 50 mM NaCl, pH: 7
Experiment: SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2022 Sep 4
Differentiating the solution structures and stability of transthyretin tetramer complexed with tolcapone and tafamidis using SEC-SWAXS and NMR
Orion Shih
RgGuinier 2.4 nm
Dmax 7.2 nm
VolumePorod 92 nm3

SASDXX3 – Transthyretin tetramer with over-saturated tolcapone

TransthyretinTolcapone experimental SAS data
COOT model
Sample: Transthyretin tetramer, 55 kDa Homo sapiens protein
Tolcapone dimer, 1 kDa
Buffer: 20 mM Tris, 50 mM NaCl, pH: 7
Experiment: SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2023 May 19
Differentiating the solution structures and stability of transthyretin tetramer complexed with tolcapone and tafamidis using SEC-SWAXS and NMR
Orion Shih
RgGuinier 2.5 nm
Dmax 8.6 nm
VolumePorod 107 nm3

SASDXY3 – Transthyretin tetramer with over-saturated tafamidis

TransthyretinTafamidis experimental SAS data
COOT model
Sample: Transthyretin tetramer, 55 kDa Homo sapiens protein
Tafamidis dimer, 1 kDa
Buffer: 20 mM Tris, 50 mM NaCl, pH: 7
Experiment: SAXS data collected at 13A, Taiwan Photon Source, NSRRC on 2023 May 19
Differentiating the solution structures and stability of transthyretin tetramer complexed with tolcapone and tafamidis using SEC-SWAXS and NMR
Orion Shih
RgGuinier 2.5 nm
Dmax 9.0 nm
VolumePorod 69 nm3

SASDVZ2 – Human Collagen Galactosyltransferase GLT25D1/COLGALT1

Procollagen galactosyltransferase 1 experimental SAS data
CORAL model
Sample: Procollagen galactosyltransferase 1 dimer, 137 kDa Homo sapiens protein
Buffer: 25 mM HEPES, 0.1 M NaCl, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2022 Jun 5
Molecular structure and enzymatic mechanism of the human collagen hydroxylysine galactosyltransferase GLT25D1/COLGALT1 Nature Communications 16(1) (2025)
De Marco M, Rai S, Scietti L, Mattoteia D, Liberi S, Moroni E, Pinnola A, Vetrano A, Iacobucci C, Santambrogio C, Colombo G, Forneris F
RgGuinier 4.3 nm
Dmax 14.0 nm
VolumePorod 184 nm3