Small Angle Scattering Biological Data Bank SASBDB

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SASDTY9 – HIV-1 Envelope Glycoprotein SOSIP from a transmitted founder virus of the CH505 isolate at 25 °C

CH505TFchim.6R.SOSIP.664 Env glycoprotein experimental SAS data

CH505TFchim.6R.SOSIP.664 Env glycoprotein Kratky plot

Sample:	CH505TFchim.6R.SOSIP.664 Env glycoprotein trimer, 217 kDa HIV-1 group M protein
Buffer:	15 mM HEPES, 150 mM NaCl, pH: 7.1
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 1

Microsecond dynamics control the HIV-1 Envelope conformation. Sci Adv 10(5):eadj0396 (2024)
Bennett AL, Edwards R, Kosheleva I, Saunders C, Bililign Y, Williams A, Bubphamala P, Manosouri K, Anasti K, Saunders KO, Alam SM, Haynes BF, Acharya P, Henderson R

R_g^Guinier	5.3	nm
D_max	16.1	nm
Volume^Porod	731	nm³

SASDTZ9 – HIV-1 Envelope Glycoprotein SOSIP from a CH505 isolate 53 weeks post-infection at 25 °C

Sample:	CH505TFchim.6R.SOSIP.664 Env glycoprotein trimer, 217 kDa HIV-1 group M protein
Buffer:	15 mM HEPES, 150 mM NaCl, pH: 7.1
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 1

R_g^Guinier	5.4	nm
D_max	16.7	nm
Volume^Porod	768	nm³

SASDU22 – HIV-1 Envelope Glycoprotein SOSIP from a CH505 isolate 78 weeks post-infection at 25 °C

Sample:	CH505TFchim.6R.SOSIP.664 Env glycoprotein trimer, 217 kDa HIV-1 group M protein
Buffer:	15 mM HEPES, 150 mM NaCl, pH: 7.1
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 1

R_g^Guinier	5.1	nm
D_max	16.0	nm
Volume^Porod	709	nm³

SASDU32 – HIV-1 Envelope Glycoprotein SOSIP from a CH505 isolate 100 weeks post-infection at 25 °C

Sample:	CH505TFchim.6R.SOSIP.664 Env glycoprotein trimer, 217 kDa HIV-1 group M protein
Buffer:	15 mM HEPES, 150 mM NaCl, pH: 7.1
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 1

R_g^Guinier	5.2	nm
D_max	17.2	nm
Volume^Porod	770	nm³

SASDU42 – HIV-1 Envelope Glycoprotein SOSIP from a BG505 isolate containing T332N mutation at 25 °C

BG505SOSIP.664T332N Env glycoprotein experimental SAS data

BG505SOSIP.664T332N Env glycoprotein Kratky plot

Sample:	BG505SOSIP.664T332N Env glycoprotein trimer, 213 kDa HIV-1 group M protein
Buffer:	15 mM HEPES, 150 mM NaCl, pH: 7.1
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2017 Jun 1

R_g^Guinier	5.0	nm
D_max	20.7	nm
Volume^Porod	712	nm³

SASDRD8 – Drosophila melanogaster kinesin heavy chain

Kinesin heavy chain (A515T) experimental SAS data

Sample:	Kinesin heavy chain (A515T) dimer, 221 kDa Drosophila melanogaster protein
Buffer:	25 mM HEPES/KOH, 150 mM NaCl, 1 mM MgCl2, 2 mM DTT, pH: 7.3
Experiment:	SAXS data collected at BM29, ESRF on 2022 Feb 19

Tropomyosin 1-I/C coordinates kinesin-1 and dynein motors during oskar mRNA transport. Nat Struct Mol Biol (2024)
Heber S, McClintock MA, Simon B, Mehtab E, Lapouge K, Hennig J, Bullock SL, Ephrussi A

R_g^Guinier	10.0	nm
D_max	45.0	nm
Volume^Porod	920	nm³

SASDRE8 – Drosophila melanogaster kinesin heavy chain + Tropomyosin1-I/C

Kinesin heavy chain (A515T)GH09289p experimental SAS data

Kinesin heavy chain (A515T) GH09289p Kratky plot

Sample:	Kinesin heavy chain (A515T) dimer, 221 kDa Drosophila melanogaster protein GH09289p dimer, 96 kDa Drosophila melanogaster protein
Buffer:	25 mM HEPES/KOH, 150 mM NaCl, 1 mM MgCl2, 2 mM DTT, pH: 7.3
Experiment:	SAXS data collected at BM29, ESRF on 2022 Feb 19

R_g^Guinier	8.7	nm
D_max	45.0	nm
Volume^Porod	840	nm³

SASDT82 – Halophilic Lrp transcription factor

AsnC family transcriptional regulator experimental SAS data

Sample:	AsnC family transcriptional regulator dimer, 36 kDa Haloferax mediterranei (strain … protein
Buffer:	50 mM Tris, 1.5 M NaCl, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2021 Nov 12

Global Lrp regulator protein from Haloferax mediterranei: Transcriptional analysis and structural characterization. Int J Biol Macromol :129541 (2024)
Matarredona L, García-Bonete MJ, Guío J, Camacho M, Fillat MF, Esclapez J, Bonete MJ

R_g^Guinier	2.4	nm
D_max	7.9	nm
Volume^Porod	70	nm³

SASDEU9 – Legionella pneumophila Phosphocholinase AnkX

Phosphocholinase AnkX experimental SAS data

Sample:	Phosphocholinase AnkX monomer, 107 kDa Legionella pneumophila protein
Buffer:	300 mM NaCl, 2 mM 2-mercaptoethanol and 30 mM Tris-HCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2017 Oct 20

Legionella pneumophila effector AnkX
Wenhua Zhang

R_g^Guinier	4.3	nm
D_max	14.7	nm
Volume^Porod	145	nm³

SASDRX8 – Heterodimeric complex of AfAgo protein Af1318 and AfAgo-N protein (containing N-L1-L2 domains) with a 14 base pair DNA oligoduplex in low salt buffer

Piwi protein AF_1318 (Archaeoglobus fulgidus AfAgo protein)Uncharacterized protein (AfAgo-N protein containing N-L1-L2 domains)5'-end phosphorylated DNA oligoduplex, 14 bp (MZ1288) experimental SAS data

Sample:	Piwi protein AF_1318 (Archaeoglobus fulgidus AfAgo protein) monomer, 51 kDa Archaeoglobus fulgidus (strain … protein Uncharacterized protein (AfAgo-N protein containing N-L1-L2 domains) monomer, 31 kDa Archaeoglobus fulgidus DSM … protein 5'-end phosphorylated DNA oligoduplex, 14 bp (MZ1288) monomer, 9 kDa DNA
Buffer:	20 mM TrisHCl pH 7.5, 200 mM NaCl, 5 mM MgCl2, 1 mM DTT, pH: 7.5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2019 Jul 6

The missing part: the Archaeoglobus fulgidus Argonaute forms a functional heterodimer with an N-L1-L2 domain protein. Nucleic Acids Res (2024)
Manakova E, Golovinas E, Pocevičiūtė R, Sasnauskas G, Silanskas A, Rutkauskas D, Jankunec M, Zagorskaitė E, Jurgelaitis E, Grybauskas A, Venclovas Č, Zaremba M

R_g^Guinier	2.9	nm
D_max	9.7	nm
Volume^Porod	145	nm³

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