Browse by ORGANISM: other species

SASDX29 – Non Structural Protein 15 and ADPRP Macrodomain D

Non structural Protein 15 in Complex with ADPRP Macrodomain experimental SAS data
Non structural Protein 15 in Complex with ADPRP Macrodomain Kratky plot
Sample: Non structural Protein 15 in Complex with ADPRP Macrodomain monomer, 254 kDa Severe acute respiratory … protein
Buffer: 20mM HEPES, 150mM Nacl, pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR-Central Drug Research Institute on 2025 Mar 20
Non Structural Protein 15 in Complex with ADPRP Macrodomain of SARS CoV 2
Hira Singh Gariya
RgGuinier 6.1 nm

SASDVH9 – allergen Hev b 8 protein, Profilin-2 (TAG)

Profilin-2 experimental SAS data
CORAL model
Sample: Profilin-2 monomer, 18 kDa Hevea brasiliensis protein
Buffer: 20 mM Tris, 50 mM NaCl, pH: 8.4
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Oct 3
Allergen-induced structural rearrangements in IgE: insights from SAXS and molecular dynamics. Int J Biol Macromol :147658 (2025)
Gómez-Velasco H, García-Ramírez B, Siliqi D, Graewert MA, Quintero-Martinez A, Ortega E, Rodríguez-Romero A
RgGuinier 2.0 nm
Dmax 7.4 nm
VolumePorod 30 nm3

SASDXJ4 – Allergen Hev b 8 protein, Profilin-2

Profilin-2 experimental SAS data
GASBOR model
Sample: Profilin-2 monomer, 18 kDa Hevea brasiliensis protein
Buffer: 20 mM Tris, 50 mM NaCl, pH: 8.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2025 Apr 11
Allergen-induced structural rearrangements in IgE: insights from SAXS and molecular dynamics. Int J Biol Macromol :147658 (2025)
Gómez-Velasco H, García-Ramírez B, Siliqi D, Graewert MA, Quintero-Martinez A, Ortega E, Rodríguez-Romero A
RgGuinier 1.7 nm
Dmax 4.5 nm
VolumePorod 21 nm3

SASDXC3 – Dengue Virus 2 (DENV2) 5' UTR

DENV2 5' untranslated terminal region experimental SAS data
DAMMIN model
Sample: DENV2 5' untranslated terminal region monomer, 57 kDa RNA
Buffer: 10 mM Bis-Tris, 100 mM NaCl, 5 mM MgCl2, 15 mM KCl, 5% glycerol, pH: 6
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Sep 10
Structural Dynamics of Dengue Virus UTRs and Their Cyclization. Biophys J (2025)
Robinson ZE, Pereira HS, D'Souza MH, Patel TR
RgGuinier 3.7 nm
Dmax 11.5 nm
VolumePorod 57 nm3

SASDXD3 – Dengue Virus 2 (DENV2) 3' UTR

DENV2 3' untranslated region experimental SAS data
DAMMIN model
Sample: DENV2 3' untranslated region monomer, 160 kDa RNA
Buffer: 10 mM Bis-Tris, 100 mM NaCl, 5 mM MgCl2, 15 mM KCl, 5% glycerol, pH: 6
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Sep 10
Structural Dynamics of Dengue Virus UTRs and Their Cyclization. Biophys J (2025)
Robinson ZE, Pereira HS, D'Souza MH, Patel TR
RgGuinier 6.0 nm
Dmax 18.7 nm
VolumePorod 155 nm3

SASDXE3 – Dengue Virus 2 (DENV2) complex 5'-3'

DENV2 complex 5'-3' experimental SAS data
DAMMIN model
Sample: DENV2 complex 5'-3' monomer, 217 kDa RNA
Buffer: 10 mM Bis-Tris, 100 mM NaCl, 5 mM MgCl2, 15 mM KCl, 5% glycerol, pH: 6
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Sep 10
Structural Dynamics of Dengue Virus UTRs and Their Cyclization. Biophys J (2025)
Robinson ZE, Pereira HS, D'Souza MH, Patel TR
RgGuinier 7.5 nm
Dmax 22.0 nm
VolumePorod 320 nm3

SASDXT3 – Dengue Virus 2 (DENV2) RNA, 5' Untranslated region

DENV2 RNA, 5' Untranslated region experimental SAS data
DAMMIN model
Sample: DENV2 RNA, 5' Untranslated region monomer, 57 kDa RNA
Buffer: 10 mM Bis-Tris, 100 mM NaCl, 5 mM MgCl2, 15 mM KCl, 5% glycerol, pH: 6
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Sep 8
Structural Dynamics of Dengue Virus UTRs and Their Cyclization. Biophys J (2025)
Robinson ZE, Pereira HS, D'Souza MH, Patel TR
RgGuinier 3.7 nm
Dmax 11.5 nm
VolumePorod 66 nm3

SASDWH3 – Thomasclavelia ramosa immunoglobulin A protease N-terminal domain

IgA protease experimental SAS data
ALPHAFOLD model
Sample: IgA protease monomer, 32 kDa Thomasclavelia ramosa protein
Buffer: 25 mM HEPES, 1 mM TCEP, pH: 7.5
Experiment: SAXS data collected at ID7A1 BioSAXS / HP-Bio Beamline, Cornell High Energy Synchrotron Source (CHESS) on 2023 Jun 26
Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases. Proc Natl Acad Sci U S A 122(35):e2503549122 (2025)
Tran N, Frenette A, Holyoak T
RgGuinier 1.9 nm
Dmax 6.0 nm
VolumePorod 38 nm3

SASDWJ3 – Thomasclavelia ramosa immunoglobulin A protease middle (protease) domain

IgA protease experimental SAS data
ALPHAFOLD model
Sample: IgA protease monomer, 55 kDa Thomasclavelia ramosa protein
Buffer: 25 mM HEPES, 1 mM TCEP, pH: 7.5
Experiment: SAXS data collected at ID7A1 BioSAXS / HP-Bio Beamline, Cornell High Energy Synchrotron Source (CHESS) on 2023 Jun 26
Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases. Proc Natl Acad Sci U S A 122(35):e2503549122 (2025)
Tran N, Frenette A, Holyoak T
RgGuinier 2.6 nm
Dmax 8.8 nm
VolumePorod 82 nm3

SASDWK3 – Thomasclavelia ramosa immunoglobulin A protease middle domain with C-terminal domain #1

IgA protease experimental SAS data
PHENIX model
Sample: IgA protease monomer, 63 kDa Thomasclavelia ramosa protein
Buffer: 25 mM HEPES, 1 mM TCEP, pH: 7.5
Experiment: SAXS data collected at ID7A1 BioSAXS / HP-Bio Beamline, Cornell High Energy Synchrotron Source (CHESS) on 2023 Jun 26
Structure of the Thomasclavelia ramosa immunoglobulin A protease reveals a modular and minimizable architecture distinct from other immunoglobulin A proteases. Proc Natl Acad Sci U S A 122(35):e2503549122 (2025)
Tran N, Frenette A, Holyoak T
RgGuinier 2.7 nm
Dmax 9.2 nm
VolumePorod 89 nm3