Small Angle Scattering Biological Data Bank SASBDB

SASBDB entries for UniProt ID:

SASDVC8 – Hendra virus protein P/V/W PNT3 domain

UniProt ID: P0C1C6 (200-310) Protein W

Hendra virus protein P/V/W PNT3 domain Rg histogram

Sample:	Protein W monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at BM29, ESRF on 2023 Jun 13

Unraveling the molecular grammar and the structural transitions underlying the fibrillation of a viral fibrillogenic domain. Protein Sci 34(3):e70068 (2025)
Gondelaud F, Leval J, Arora L, Walimbe A, Bignon C, Ptchelkine D, Brocca S, Mukhopadyay S, Longhi S

R_g^Guinier	3.4	nm
D_max	13.5	nm
Volume^Porod	42	nm³

SASDVD8 – Hendra virus protein P/V/W PNT3 low-K domain

UniProt ID: None (200-310) Protein W (artificial PNT3 variant - low-kappa)

Protein W (artificial PNT3 variant - low-kappa) experimental SAS data

Hendra virus protein P/V/W PNT3 low-K domain Rg histogram

Sample:	Protein W (artificial PNT3 variant - low-kappa) monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at BM29, ESRF on 2023 Jun 13

R_g^Guinier	3.8	nm
D_max	18.0	nm
Volume^Porod	48	nm³

SASDVE8 – Hendra virus protein P/V/W PNT3 high-K domain

UniProt ID: None (200-310) Protein W (artificial PNT3 variant - high-kappa)

Protein W (artificial PNT3 variant - high-kappa) experimental SAS data

Hendra virus protein P/V/W PNT3 high-K domain Rg histogram

Sample:	Protein W (artificial PNT3 variant - high-kappa) monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at SWING, SOLEIL on 2024 Apr 5

R_g^Guinier	3.1	nm
D_max	14.7	nm
Volume^Porod	54	nm³

SASDVF8 – S9 peptidase form Mycobacterium phlei (8 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

Structural and Functional Investigation of Putative Peptidase from Mycolicibacterium phlei : An Exclusive Endopeptidase among S9C Subfamily Biochemistry (2025)
Chandravanshi K, Jamdar S, Singh R, Kumar A, Mahato A, Agrawal R, Kumar S, Kumar A, Makde R

R_g^Guinier	5.2	nm
D_max	15.8	nm
Volume^Porod	559	nm³

SASDVG8 – S9 peptidase form Mycobacterium phlei (6 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

R_g^Guinier	5.0	nm
D_max	15.7	nm
Volume^Porod	546	nm³

SASDVH8 – S9 peptidase form Mycobacterium phlei (4 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

R_g^Guinier	5.1	nm
D_max	16.2	nm
Volume^Porod	563	nm³

SASDVQ9 – Full-length mature human mitochondrial ATP synthase subunit O (Oligomycin Sensitivity Conferral Protein or Complex V subunit O)

UniProt ID: P48047 (None-None) ATP synthase subunit O, mitochondrial

ATP synthase subunit O, mitochondrial experimental SAS data

Sample:	ATP synthase subunit O, mitochondrial dimer, 42 kDa Homo sapiens protein
Buffer:	50 mM Na2HPO4, 300 mM NaCl, pH: 7
Experiment:	SAXS data collected at BM29, ESRF on 2022 Mar 15

Unveiling the structural properties of the ATP Synthase subunit OSCP by SAXS
Gabriele Giachin

R_g^Guinier	3.7	nm
D_max	12.0	nm
Volume^Porod	78	nm³

SASDVR9 – C-terminal tail of human mitochondrial ATP synthase subunit O (137-213) (Oligomycin Sensitivity Conferral Protein or Complex V subunit O)

UniProt ID: P48047 (137-213) ATP synthase subunit O, mitochondrial C-terminal section

ATP synthase subunit O, mitochondrial C-terminal section experimental SAS data

Sample:	ATP synthase subunit O, mitochondrial C-terminal section trimer, 25 kDa Homo sapiens protein
Buffer:	50 mM Na2HPO4, 300 mM NaCl, pH: 7
Experiment:	SAXS data collected at BM29, ESRF on 2022 Mar 15

Unveiling the structural properties of the ATP Synthase subunit OSCP by SAXS
Gabriele Giachin

R_g^Guinier	2.1	nm
D_max	6.5	nm
Volume^Porod	32	nm³

SASDVT9 – BioSAXS Analysis of Xylose Isomerase from Bacteroides thetaiotaomicron in PBS

UniProt ID: Q8A9M2 (1-438) Xylose isomerase

Sample:	Xylose isomerase tetramer, 196 kDa Bacteroides thetaiotaomicron (strain … protein
Buffer:	PBS, pH: 7.4
Experiment:	SAXS data collected at BioSAXS, Australian Synchrotron on 2024 Oct 22

BioSAXS Australian Synchrotron Standard Protein
Annmaree Warrender

R_g^Guinier	3.5	nm
D_max	9.9	nm
Volume^Porod	222	nm³

SASDW72 – Non-deuterated N-acetylglucosamine binding Protein A (H-GbpA) in 47 % D₂O, 2.5 mg/mL

UniProt ID: Q9KLD5 (24-485) GlcNAc-binding protein A

GlcNAc-binding protein A experimental SAS data

Sample:	GlcNAc-binding protein A monomer, 51 kDa Vibrio cholerae serotype … protein
Buffer:	100 mM NaCl, 20 mM Tris, 47% v/v D₂O, pH: 8
Experiment:	SANS data collected at D11, ILL on 2020 Aug 18

Tangled up in fibers: How a lytic polysaccharide monooxygenase binds its chitin substrate
Henrik Vinther Sørensen

R_g^Guinier

25.0

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