SASBDB entries for UniProt ID:

SASDFB5 – Phosphorylated Resistance to inhibitors of cholinesterase 8 homolog A, Ric-8A, amino acids 1-452 (Rattus norvegicus)

UniProt ID: B1H241 (1-452) Resistance to inhibitors of cholinesterase 8 homolog A
Resistance to inhibitors of cholinesterase 8 homolog A experimental SAS data
Resistance to inhibitors of cholinesterase 8 homolog A Kratky plot
Sample: Resistance to inhibitors of cholinesterase 8 homolog A monomer, 51 kDa Rattus norvegicus protein
Buffer: 25 mM HEPES, 150 mM NaCl, pH: 8
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Apr 24
Structure, Function, and Dynamics of the Gα Binding Domain of Ric-8A. Structure (2019)
Zeng B, Mou TC, Doukov TI, Steiner A, Yu W, Papasergi-Scott M, Tall GG, Hagn F, Sprang SR
RgGuinier 3.0 nm
Dmax 10.1 nm
VolumePorod 70 nm3

SASDFC5 – Enhanced disease susceptibility 1 (EDS1)

UniProt ID: Q9SU72 (None-None) Enhanced disease susceptibility
Enhanced disease susceptibility experimental SAS data
DAMMIN model
Sample: Enhanced disease susceptibility monomer, 72 kDa Arabidopsis thaliana protein
Buffer: 50 mM NaCl, 50 mM HEPES, 1% glyercol, 1 mM DTT, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2015 May 19
Arabidopsis immunity regulator EDS1 in a PAD4/SAG101-unbound form is a monomer with an inherently inactive conformation. J Struct Biol :107390 (2019)
Voss M, Toelzer C, Bhandari DD, Parker JE, Niefind K
RgGuinier 3.1 nm
Dmax 10.5 nm
VolumePorod 92 nm3

SASDFD5 – Tetracycline repressor (class D), TetR(D)

UniProt ID: P0ACT4 (2-208) Tetracycline repressor (class D)
Tetracycline repressor (class D) experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Tetracycline repressor (class D) dimer, 47 kDa Escherichia coli protein
Buffer: 50 mM Tris/HCl 150 mM NaCl 10 mM MgCl2, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2013 Sep 23
Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding. Biochim Biophys Acta Proteins Proteom :140404 (2020)
Palm GJ, Buchholz I, Werten S, Girbardt B, Berndt L, Delcea M, Hinrichs W
RgGuinier 2.6 nm
Dmax 7.7 nm
VolumePorod 85 nm3

SASDFE5 – Tetracycline repressor (class D), TetR(D), in complex with 5a,6-anhydrotetracycline (ATc)

UniProt ID: P0ACT4 (2-208) Tetracycline repressor (class D)

UniProt ID: None (None-None) 5a,6-anhydrotetracycline
Tetracycline repressor (class D)5a,6-anhydrotetracycline experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Tetracycline repressor (class D) dimer, 47 kDa Escherichia coli protein
5a,6-anhydrotetracycline dimer, 1 kDa
Buffer: 50 mM Tris/HCl 150 mM NaCl 10 mM MgCl2, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2013 Sep 23
Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding. Biochim Biophys Acta Proteins Proteom :140404 (2020)
Palm GJ, Buchholz I, Werten S, Girbardt B, Berndt L, Delcea M, Hinrichs W
RgGuinier 2.6 nm
Dmax 6.8 nm
VolumePorod 77 nm3

SASDFL5 – Plasmodium falciparum Hsp70/Hsp90 organizing protein, Hop

UniProt ID: Q8ILC1 (None-None) STI1-like protein
STI1-like protein experimental SAS data
DAMFILT model
Sample: STI1-like protein dimer, 136 kDa Plasmodium falciparum protein
Buffer: 25 mM Tris-HCl, 100 mM NaCl, 1 mM EDTA, 1 mM β-mercaptoethanol, pH: 8
Experiment: SAXS data collected at SAXS1 Beamline, Brazilian Synchrotron Light Laboratory on 2016 Aug 3
Structural studies of the Hsp70/Hsp90 organizing protein of Plasmodium falciparum and its modulation of Hsp70 and Hsp90 ATPase activities. Biochim Biophys Acta Proteins Proteom :140282 (2019)
Silva NSM, Bertolino-Reis DE, Dores-Silva PR, Anneta FB, Seraphim TV, Barbosa LRS, Borges JC
RgGuinier 6.3 nm
Dmax 24.0 nm
VolumePorod 557 nm3

SASDFM5 – Mutant 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, H110A tetramer, at pH 8.5

UniProt ID: Q83V25 (1-334) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase
2-amino-3-carboxymuconate 6-semialdehyde decarboxylase experimental SAS data
CORAL model
Sample: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase tetramer, 159 kDa Pseudomonas fluorescens protein
Buffer: 50 mM Tris, 5 mM DTT, pH: 8.5
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Jul 15
Quaternary structure of α-amino-β-carboxymuconate-ϵ-semialdehyde decarboxylase (ACMSD) controls its activity. J Biol Chem 294(30):11609-11621 (2019)
Yang Y, Davis I, Matsui T, Rubalcava I, Liu A
RgGuinier 5.2 nm
Dmax 19.0 nm
VolumePorod 238 nm3

SASDFN5 – Wild type 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase, ACMSD tetramer, at pH 7.0

UniProt ID: Q83V25 (1-334) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase
2-amino-3-carboxymuconate 6-semialdehyde decarboxylase experimental SAS data
CORAL model
Sample: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase tetramer, 159 kDa Pseudomonas fluorescens protein
Buffer: 25 mM HEPES, 5 mM DTT, pH: 7
Experiment: SAXS data collected at BL4-2, Stanford Synchrotron Radiation Lightsource (SSRL) on 2018 Jan 10
Quaternary structure of α-amino-β-carboxymuconate-ϵ-semialdehyde decarboxylase (ACMSD) controls its activity. J Biol Chem 294(30):11609-11621 (2019)
Yang Y, Davis I, Matsui T, Rubalcava I, Liu A
RgGuinier 4.7 nm
Dmax 17.5 nm
VolumePorod 195 nm3

SASDF76 – Polyphosphate-targeting protein A

UniProt ID: A0A2N9BBV4 (1-374) Polyphosphate-targeting protein A
Polyphosphate-targeting protein A experimental SAS data
CORAL model
Sample: Polyphosphate-targeting protein A dimer, 79 kDa Streptomyces chartreusis protein
Buffer: 20 mM Tris-HCl 400 mM NaCl, pH: 7.4
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Nov 24
Structural and biochemical analysis of a phosin from Streptomyces chartreusis reveals a combined polyphosphate- and metal-binding fold. FEBS Lett (2019)
Werten S, Rustmeier NH, Gemmer M, Virolle MJ, Hinrichs W
RgGuinier 3.5 nm
Dmax 11.8 nm
VolumePorod 124 nm3

SASDF86 – Human Galectin-10 (Tyr69Glu mutant)

UniProt ID: Q05315 (None-None) Galectin-10 Tyr69Glu
Galectin-10 Tyr69Glu experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Galectin-10 Tyr69Glu dimer, 33 kDa Homo sapiens protein
Buffer: 20 mM Hepes 150 NaCl, pH: 7.4
Experiment: SAXS data collected at SWING, SOLEIL on 2018 Feb 4
Protein crystallization promotes type 2 immunity and is reversible by antibody treatment. Science 364(6442) (2019)
Persson EK, Verstraete K, Heyndrickx I, Gevaert E, Aegerter H, Percier JM, Deswarte K, Verschueren KHG, Dansercoer A, Gras D, Chanez P, Bachert C, Gonçalves A, Van Gorp H, De Haard H, Blanchetot C, Saunders M, Hammad H, Savvides SN, Lambrecht BN
RgGuinier 2.1 nm
Dmax 8.2 nm
VolumePorod 46 nm3

SASDF96 – Olfactomedin-1 BMY isoform

UniProt ID: O88998-2 (17-153) Noelin
Noelin experimental SAS data
DAMMIF model
Sample: Noelin tetramer, 72 kDa Mus musculus protein
Buffer: 150 mM NaCl, 20 mM HEPES, pH: 7.5
Experiment: SAXS data collected at BM29, ESRF on 2016 Feb 5
Design and structural characterisation of olfactomedin-1 variants as tools for functional studies. BMC Mol Cell Biol 20(1):50 (2019)
Pronker MF, van den Hoek H, Janssen BJC
RgGuinier 5.4 nm
Dmax 16.3 nm
VolumePorod 160 nm3