Small Angle Scattering Biological Data Bank SASBDB

Browse by MODEL: Ab initio only

SASDFG5 – His-RuvBl1/RuvBl2 dodecamer

RuvB-like 1RuvB-like 2 experimental SAS data

Sample:	RuvB-like 1 hexamer, 311 kDa Homo sapiens protein RuvB-like 2 hexamer, 311 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1% glycerol, 5 mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Mar 21

Deciphering cellular and molecular determinants of human DPCD protein in complex with RUVBL1/RUVBL2 AAA-ATPases. J Mol Biol :167760 (2022)
Dos Santos Morais R, Santo PE, Ley M, Schelcher C, Abel Y, Plassart L, Deslignière E, Chagot ME, Quinternet M, Paiva ACF, Hessmann S, Morellet N, M F Sousa P, Vandermoere F, Bertrand E, Charpentier B, Bandeiras TM, Plisson-Chastang C, Verheggen C, Cianférani S, Manival X

R_g^Guinier	6.2	nm
D_max	20.0	nm
Volume^Porod	1490	nm³

SASDFH5 – DPCD His-RuvBl1/RuvBl2 hexamer complex

Protein DPCDRuvB-like 1RuvB-like 2 experimental SAS data

Sample:	Protein DPCD trimer, 71 kDa Homo sapiens protein RuvB-like 1 trimer, 155 kDa Homo sapiens protein RuvB-like 2 trimer, 156 kDa Homo sapiens protein
Buffer:	20 mM HEPES, 150 mM NaCl, 1% glycerol, 5 mM TCEP, pH: 7.5
Experiment:	SAXS data collected at SWING, SOLEIL on 2019 Mar 21

R_g^Guinier	5.4	nm
D_max	15.9	nm
Volume^Porod	856	nm³

SASDNU5 – Lysin from Streptococcus phage P7951 ∆1-208

lysin [Streptococcus phage P7951] experimental SAS data

Sample:	Lysin [Streptococcus phage P7951] hexamer, 65 kDa Streptococcus phage P7951 protein
Buffer:	50 mM HEPES, 500 mM NaCl, and 1% glycerol, pH: 7
Experiment:	SAXS data collected at BM29, ESRF on 2021 Nov 21

On the Occurrence and Multimerization of Two-Polypeptide Phage Endolysins Encoded in Single Genes. Microbiol Spectr :e0103722 (2022)
Pinto D, Gonçalo R, Louro M, Silva MS, Hernandez G, Cordeiro TN, Cordeiro C, São-José C

R_g^Guinier	3.1	nm
D_max	10.1	nm
Volume^Porod	111	nm³

SASDNE5 – Acinetobacter baumannii aconitate hydratase B, monomer/dimer mixed fraction

Aconitate hydratase B experimental SAS data

Sample:	Aconitate hydratase B, 96 kDa Acinetobacter baumannii protein
Buffer:	100 mM NaCl, 20 mM Tris, 1 mM DTT, 3% v/v glycerol, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Dec 3

Recombinant AcnB, NrdR and RibD of Acinetobacter baumannii and their potential interaction with DNA adenine methyltransferase AamA. Protein Expr Purif :106134 (2022)
Weber K, Doellinger J, Jeffries CM, Wilharm G

R_g^Guinier	4.0	nm
D_max	14.0	nm
Volume^Porod	230	nm³

SASDPJ4 – N-terminal domain of EccA5

ESX-5 secretion system protein EccA5 experimental SAS data

Sample:	ESX-5 secretion system protein EccA5 monomer, 31 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	20 mM Tris, 150 mM NaCl, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2018 Mar 9

Structural and Biophysical characterization of N-terminal domain of EccA5 from Mycobacterium tuberculosis.
Jyoti Vishwakarma

R_g^Guinier	2.6	nm
D_max	7.8	nm
Volume^Porod	57	nm³

SASDNK9 – Monomer of the full-length apo-polyketide synthase Pks13 of Mycobacterium tuberculosis

Polyketide synthase Pks13 experimental SAS data

Sample:	Polyketide synthase Pks13 monomer, 188 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris-HCl, 50 mM NaCl, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2013 Mar 1

Solution structure of the type I polyketide synthase Pks13 from Mycobacterium tuberculosis. BMC Biol 20(1):147 (2022)
Bon C, Cabantous S, Julien S, Guillet V, Chalut C, Rima J, Brison Y, Malaga W, Sanchez-Dafun A, Gavalda S, Quémard A, Marcoux J, Waldo GS, Guilhot C, Mourey L

R_g^Guinier	7.3	nm
D_max	24.8	nm
Volume^Porod	480	nm³

SASDNL9 – Full length apo-polyketide synthase Pks13(S1533A) with Ser801 loaded by a C16-carbon chain

Sample:	Polyketide synthase Pks13 dimer, 376 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris-HCl, 50 mM NaCl, pH: 8
Experiment:	SAXS data collected at SWING, SOLEIL on 2011 Nov 23

R_g^Guinier	10.3	nm
D_max	36.0	nm
Volume^Porod	2300	nm³

SASDNM9 – Thioesterase domain of polyketide synthase Pks13 at neutral pH

Sample:	Polyketide synthase Pks13 monomer, 33 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris-HCl, 50 mM NaCl, pH: 8
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2006 Nov 1

R_g^Guinier	1.9	nm
D_max	5.5	nm
Volume^Porod	56	nm³

SASDNN9 – di-domain sub fragment ACP2TE of polyketide synthase Pks13 at neutral pH

Sample:	Polyketide synthase Pks13 monomer, 62 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris-HCl 50 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2006 Nov 1

R_g^Guinier	3.2	nm
D_max	12.0	nm
Volume^Porod	80	nm³

SASDNP9 – AT52: acyltransferase domain and insertion domain of polyketide synthase Pks13 at neutral pH

Sample:	Polyketide synthase Pks13 monomer, 53 kDa Mycobacterium tuberculosis (strain … protein
Buffer:	50 mM Tris-HCl, 300 mM NaCl, pH: 8
Experiment:	SAXS data collected at EMBL X33, DORIS III, DESY on 2006 Nov 1

R_g^Guinier	3.5	nm
D_max	12.0	nm
Volume^Porod	115	nm³

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