Small Angle Scattering Biological Data Bank SASBDB

SASDJ62 – DNA repair protein XRCC1 monomer /dimer

DNA repair protein XRCC1 experimental SAS data

Sample:	DNA repair protein XRCC1 , 69 kDa Homo sapiens protein
Buffer:	200 mM NaCl, 20 mM Tris-HCl, pH 7.5, 2% glycerol, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2018 Jun 19

An atypical BRCT-BRCT interaction with the XRCC1 scaffold protein compacts human DNA Ligase IIIα within a flexible DNA repair complex. Nucleic Acids Res (2020)
Hammel M, Rashid I, Sverzhinsky A, Pourfarjam Y, Tsai MS, Ellenberger T, Pascal JM, Kim IK, Tainer JA, Tomkinson AE

R_g^Guinier	6.3	nm
D_max	26.9	nm
Volume^Porod	330	nm³

SASDJ72 – DNA Ligase IIIα monomer/dimer

DNA ligase 3 (DNA ligase III alpha) experimental SAS data

Sample:	DNA ligase 3 (DNA ligase III alpha) , Homo sapiens protein
Buffer:	25 mM Tris-HCl pH 7.5, 150 mM NaCl, 10% glycerol, 2 mM DTT, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2011 Mar 31

R_g^Guinier	6.1	nm
D_max	21.0	nm
Volume^Porod	240	nm³

SASDJ82 – DNA repair protein XRCC1 - DNA Ligase IIIα complex

DNA repair protein XRCC1DNA ligase 3 (DNA ligase III alpha) experimental SAS data

Sample:	DNA repair protein XRCC1 , 69 kDa Homo sapiens protein DNA ligase 3 (DNA ligase III alpha) , Homo sapiens protein
Buffer:	50 mM Tris-HCl, pH 7.5, 100 mM NaCl, 5 mM MgCl₂, 0.2 mM PMSF, 1 mM benzamidine, pH: 7.5
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2019 Aug 18

R_g^Guinier	6.2	nm
D_max	27.9	nm
Volume^Porod	675	nm³

SASDK82 – Full-length nonstructural protein 2 (nsP2) of Chikungunya virus (CHIKV)

Sample:	NsP2 protein monomer, 90 kDa Chikungunya virus protein
Buffer:	20 mM Hepes pH 7.4, 150 mM NaCl, 1 mM DTT, 5% glycerol, pH: 7.4
Experiment:	SAXS data collected at 23A, Taiwan Photon Source, NSRRC on 2019 Aug 10

Inter-domain Flexibility of Chikungunya Virus nsP2 Helicase-Protease Differentially Influences Viral RNA Replication and Infectivity. J Virol (2020)
Law YS, Wang S, Tan YB, Shih O, Utt A, Goh WY, Lian BJ, Chen MW, Jeng US, Merits A, Luo D

R_g^Guinier	3.9	nm
D_max	12.0	nm
Volume^Porod	134	nm³

SASDHU4 – ECSIT C-terminal domain

Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial experimental SAS data

Sample:	Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial dimer, 44 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2017 Dec 7

Assembly of the mitochondrial Complex I assembly complex suggests a regulatory role for deflavination. Angew Chem Int Ed Engl (2020)
Giachin G, Jessop M, Bouverot R, Acajjaoui S, Saidi M, Chretien A, Bacia-Verloop M, Signor L, Mas PJ, Favier A, Borel Meneroud E, Hons M, Hart DJ, Kandiah E, Boeri Erba E, Buisson A, Leonard G, Gutsch...

R_g^Guinier	3.7	nm
D_max	11.9	nm
Volume^Porod	117	nm³

SASDHV4 – Mitochondrial complex I assembly factor, NDUFAF1

Complex I intermediate-associated protein 30, mitochondrial experimental SAS data

Sample:	Complex I intermediate-associated protein 30, mitochondrial monomer, 35 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2018 May 29

R_g^Guinier	3.3	nm
D_max	9.6	nm
Volume^Porod	82	nm³

SASDHW4 – Mitochondrial Complex I assembly factor, ACAD9

Complex I assembly factor ACAD9, mitochondrial experimental SAS data

Sample:	Complex I assembly factor ACAD9, mitochondrial dimer, 132 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2018 May 28

R_g^Guinier	3.6	nm
D_max	10.2	nm
Volume^Porod	217	nm³

SASDHX4 – Mitochondrial complex I assembly factor, ACAD9, chimeric construct where segment 445-482 has been replaced with segment 481-518 of VLCAD protein

Complex I assembly factor ACAD9-VLCAD chimera experimental SAS data

Sample:	Complex I assembly factor ACAD9-VLCAD chimera dimer, 131 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2017 Nov 30

R_g^Guinier	3.9	nm
D_max	11.7	nm
Volume^Porod	217	nm³

SASDHY4 – Mitochondrial very long-chain specific acyl-CoA dehydrogenase enzyme, VLCAD

Very long-chain specific acyl-CoA dehydrogenase, mitochondrial experimental SAS data

Sample:	Very long-chain specific acyl-CoA dehydrogenase, mitochondrial dimer, 126 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2017 Dec 2

R_g^Guinier	3.4	nm
D_max	9.9	nm
Volume^Porod	215	nm³

SASDHZ4 – The C-terminal domain of ESCIT bound to a dimer of the complex I assembly factor ACAD9

Complex I assembly factor ACAD9, mitochondrialEvolutionarily conserved signaling intermediate in Toll pathway, mitochondrial experimental SAS data

Sample:	Complex I assembly factor ACAD9, mitochondrial dimer, 132 kDa Homo sapiens protein Evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial tetramer, 88 kDa Homo sapiens protein
Buffer:	25 mM HEPES, 250 mM NaCl, pH: 7.5
Experiment:	SAXS data collected at BM29, ESRF on 2018 Oct 4

R_g^Guinier	6.0	nm
D_max	16.5	nm
Volume^Porod	683	nm³

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