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318 hits found for waxs

SASDMW8 – The disulphide-linked tetramer of splicing factor, proline- and glutamine-rich and Non-POU domain-containing octamer-binding protein (SFPQ276-598(R542C)/NONO53-312) at 0.78mg/ml

Non-POU domain-containing octamer-binding proteinSplicing factor, proline- and glutamine-rich SFPQ276-598(R542C)/NONO53-312 dimer) experimental SAS data
DAMMIF model
Sample: Non-POU domain-containing octamer-binding protein dimer, 60 kDa Homo sapiens protein
Splicing factor, proline- and glutamine-rich SFPQ276-598(R542C)/NONO53-312 dimer) dimer, 76 kDa Homo sapiens protein
Buffer: 20 mM Tris, 250 mM NaCl, pH: 7.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2015 Apr 28
Structural plasticity of the coiled-coil interactions in human SFPQ. Nucleic Acids Res (2024)
Koning HJ, Lai JY, Marshall AC, Stroeher E, Monahan G, Pullakhandam A, Knott GJ, Ryan TM, Fox AH, Whitten A, Lee M, Bond CS
RgGuinier 5.2 nm
Dmax 21.0 nm
VolumePorod 257 nm3

SASDLP3 – Interleukin 11 complex with IL-11Rα and gp130 D2-D3

Interleukin-11 receptor subunit alphaInterleukin 11Interleukin-6 receptor subunit beta experimental SAS data
OTHER model
Sample: Interleukin-11 receptor subunit alpha monomer, 32 kDa Homo sapiens protein
Interleukin 11 monomer, 18 kDa Homo sapiens protein
Interleukin-6 receptor subunit beta monomer, 23 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.2% sodium azide, pH: 8.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2019 Jun 8
Structures of the interleukin 11 signalling complex reveal gp130 dynamics and the inhibitory mechanism of a cytokine variant Nature Communications 14(1) (2023)
Metcalfe R, Hanssen E, Fung K, Aizel K, Kosasih C, Zlatic C, Doughty L, Morton C, Leis A, Parker M, Gooley P, Putoczki T, Griffin M
RgGuinier 3.6 nm
Dmax 12.9 nm
VolumePorod 127 nm3

SASDEQ4 – Deletion mutant of the suppressor of copper sensitivity C protein, PmScsC, with concentration series data

Deletion mutant of PmScsC experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Deletion mutant of PmScsC , 23 kDa Proteus mirabilis protein
Buffer: 10mM HEPES, 150mM NaCl, pH: 7.4
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2018 Apr 5
Engineered variants provide new insight into the structural properties important for activity of the highly dynamic, trimeric protein disulfide isomerase ScsC from Proteus mirabilis. Acta Crystallogr D Struct Biol 75(Pt 3):296-307 (2019)
Furlong EJ, Kurth F, Premkumar L, Whitten AE, Martin JL
RgGuinier 2.6 nm
Dmax 9.0 nm
VolumePorod 54 nm3

SASDRZ4 – K214/R260 mutant of Rabies virus CVS Phosphoprotein Isoform 3 (KRm CVS P3)

Phosphoprotein (Isoform P3; K214A, R260A, D289N, C297S) experimental SAS data
EOM/RANCH model
Sample: Phosphoprotein (Isoform P3; K214A, R260A, D289N, C297S) dimer, 55 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
Rawlinson SM, Chakraborty S, Sethi A, David CT, Harrison AR, Bird LE, Rozario AM, Uthishtran S, Ardipradja K, Zhao T, Oksayan S, Jans DA, Ang CS, Lu ZH, Yan F, Williamson NA, Arumugam S, Sundaramoorth...
RgGuinier 4.6 nm
Dmax 22.5 nm
VolumePorod 180 nm3

SASDBQ6 – Nucleolysin TIA-1 isoform p40 in complex with TTTTTACTCC DNA

Nucleolysin TIA-1 isoform p40DNA (TTTTTACTCC) experimental SAS data
Nucleolysin TIA-1 isoform p40 DNA (TTTTTACTCC) Kratky plot
Sample: Nucleolysin TIA-1 isoform p40 monomer, 21 kDa Homo sapiens protein
DNA (TTTTTACTCC) monomer, 1 kDa DNA
Buffer: 20 mM HEPES, 100 mM NaCl, 3% v/v glycerol, pH: 7
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2016 May 27
TIA-1 RRM23 binding and recognition of target oligonucleotides. Nucleic Acids Res 45(8):4944-4957 (2017)
Waris S, García-Mauriño SM, Sivakumaran A, Beckham SA, Loughlin FE, Gorospe M, Díaz-Moreno I, Wilce MCJ, Wilce JA
RgGuinier 2.1 nm
Dmax 7.1 nm
VolumePorod 32 nm3

SASDV97 – The 60bp dsDNA oligo GAGE6_2

GAGE6_2 experimental SAS data
GAGE6_2 Kratky plot
Sample: GAGE6_2 dimer, 37 kDa Homo sapiens DNA
Buffer: 150 mM KCl, 20 mM HEPES, 5% glycerol, 5 mM MgCl2, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2023 Nov 28
Probing the statistics of sequence-dependent DNA conformations in solution using SAXS. Acta Crystallogr D Struct Biol 82(Pt 2):79-99 (2026)
Koning HJ, Pullakhandam A, Whitten AE, Bond CS, Peyrard M
RgGuinier 5.2 nm
Dmax 18.4 nm
VolumePorod 72 nm3

SASDBP7 – Domain 3'X of hepatitis C virus RNA at low ionic strength

Domain 3'X of hepatitis C virus experimental SAS data
DAMMIN model
Sample: Domain 3'X of hepatitis C virus monomer, 32 kDa Hepatitis C virus RNA
Buffer: 10mM Tris 0.1 mM EDTA, pH: 7
Experiment: SAXS data collected at ...WAXS, Advanced Photon Source (APS), Argonne National Laboratory on 2015 Nov 11
Three-dimensional structure of the 3'X-tail of hepatitis C virus RNA in monomeric and dimeric states. RNA 23(9):1465-1476 (2017)
Cantero-Camacho Á, Fan L, Wang YX, Gallego J
RgGuinier 3.7 nm
Dmax 14.8 nm

SASDMW7 – Concentration dependent dimer-tetramer transition of splicing factor, proline- and glutamine-rich with Non-POU domain-containing octamer-binding protein (SFPQ276-565/NONO53-312)

Splicing factor, proline- and glutamine-rich (276-565)Non-POU domain-containing octamer-binding protein (53-312) experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Splicing factor, proline- and glutamine-rich (276-565) monomer, 34 kDa Homo sapiens protein
Non-POU domain-containing octamer-binding protein (53-312) monomer, 30 kDa Homo sapiens protein
Buffer: 20 mM Tris, 250 mM NaCl, pH: 7.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2015 Apr 28
Structural plasticity of the coiled-coil interactions in human SFPQ. Nucleic Acids Res (2024)
Koning HJ, Lai JY, Marshall AC, Stroeher E, Monahan G, Pullakhandam A, Knott GJ, Ryan TM, Fox AH, Whitten A, Lee M, Bond CS
RgGuinier 3.0 nm
Dmax 12.7 nm
VolumePorod 102 nm3

SASDLS3 – Interleukin 11 Mutein, complex with gp130 (domains 1-3) and IL-11Rα

Interleukin-11 receptor subunit alphaInterleukin 11 MuteinInterleukin-6 receptor subunit beta experimental SAS data
DAMMIN model
Sample: Interleukin-11 receptor subunit alpha monomer, 32 kDa Homo sapiens protein
Interleukin 11 Mutein monomer, 18 kDa Homo sapiens protein
Interleukin-6 receptor subunit beta monomer, 35 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.2% sodium azide, pH: 8.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2019 Jun 8
Structures of the interleukin 11 signalling complex reveal gp130 dynamics and the inhibitory mechanism of a cytokine variant Nature Communications 14(1) (2023)
Metcalfe R, Hanssen E, Fung K, Aizel K, Kosasih C, Zlatic C, Doughty L, Morton C, Leis A, Parker M, Gooley P, Putoczki T, Griffin M
RgGuinier 4.4 nm
Dmax 15.6 nm
VolumePorod 160 nm3

SASDRY4 – D289N mutant of Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3)

Phosphoprotein (Isoform P3; D289N, C297S) experimental SAS data
D289N mutant of Rabies virus CVS Phosphoprotein Isoform 3 (CVS P3) Rg histogram
Sample: Phosphoprotein (Isoform P3; D289N, C297S) dimer, 56 kDa Rabies virus (strain … protein
Buffer: 25 mM HEPES, 150 mM NaCl, 1 mM TCEP, pH: 7.4
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2021 Mar 7
Conformational dynamics, RNA binding, and phase separation regulate the multifunctionality of rabies virus P protein. Nat Commun 16(1):9491 (2025)
Rawlinson SM, Chakraborty S, Sethi A, David CT, Harrison AR, Bird LE, Rozario AM, Uthishtran S, Ardipradja K, Zhao T, Oksayan S, Jans DA, Ang CS, Lu ZH, Yan F, Williamson NA, Arumugam S, Sundaramoorth...
RgGuinier 3.9 nm
Dmax 17.0 nm
VolumePorod 128 nm3

SASDBN6 – Nucleolysin TIA-1 isoform p40 in complex with ACUCCUUUUU RNA

Nucleolysin TIA-1 isoform p40RNA (ACUCCUUUUU) experimental SAS data
Nucleolysin TIA-1 isoform p40 RNA (ACUCCUUUUU) Kratky plot
Sample: Nucleolysin TIA-1 isoform p40 monomer, 21 kDa Homo sapiens protein
RNA (ACUCCUUUUU) monomer, 1 kDa RNA
Buffer: 20 mM HEPES, 100 mM NaCl, 3% v/v glycerol, pH: 7
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2016 May 27
TIA-1 RRM23 binding and recognition of target oligonucleotides. Nucleic Acids Res 45(8):4944-4957 (2017)
Waris S, García-Mauriño SM, Sivakumaran A, Beckham SA, Loughlin FE, Gorospe M, Díaz-Moreno I, Wilce MCJ, Wilce JA
RgGuinier 2.2 nm
Dmax 6.6 nm
VolumePorod 30 nm3

SASDVA7 – The 60bp dsDNA oligo GAGE6_3

GAGE6_3 experimental SAS data
GAGE6_3 Kratky plot
Sample: GAGE6_3 dimer, 37 kDa Homo sapiens DNA
Buffer: 150 mM KCl, 20 mM HEPES, 5% glycerol, 5 mM MgCl2, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2023 Nov 28
Probing the statistics of sequence-dependent DNA conformations in solution using SAXS. Acta Crystallogr D Struct Biol 82(Pt 2):79-99 (2026)
Koning HJ, Pullakhandam A, Whitten AE, Bond CS, Peyrard M
RgGuinier 5.0 nm
Dmax 21.4 nm
VolumePorod 80 nm3

SASDT72 – GAGE6 60bp dsDNA oligonucleotide

GAGE6 60bp dsDNA oligo experimental SAS data
DAMMIN model
Sample: GAGE6 60bp dsDNA oligo monomer, 37 kDa Homo sapiens DNA
Buffer: 150 mM KCl, 20 mM HEPES, 5% glycerol, 5 mM MgCl2, 1 mM DTT, pH: 7.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2023 Mar 14
Probing the statistics of sequence-dependent DNA conformations in solution using SAXS. Acta Crystallogr D Struct Biol 82(Pt 2):79-99 (2026)
Koning HJ, Pullakhandam A, Whitten AE, Bond CS, Peyrard M
RgGuinier 4.7 nm
Dmax 20.7 nm
VolumePorod 101 nm3

SASDLR3 – Interleukin 11 Mutein

Interleukin 11 Mutein experimental SAS data
OTHER model
Sample: Interleukin 11 Mutein monomer, 18 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.2% sodium azide, pH: 8.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2019 Jun 8
Structures of the interleukin 11 signalling complex reveal gp130 dynamics and the inhibitory mechanism of a cytokine variant Nature Communications 14(1) (2023)
Metcalfe R, Hanssen E, Fung K, Aizel K, Kosasih C, Zlatic C, Doughty L, Morton C, Leis A, Parker M, Gooley P, Putoczki T, Griffin M
RgGuinier 1.8 nm
Dmax 5.4 nm
VolumePorod 25 nm3

SASDBP6 – Nucleolysin TIA-1 isoform p40 in complex with ACTCCTTTTT DNA

Nucleolysin TIA-1 isoform p40DNA (ACTCCTTTTT) experimental SAS data
Nucleolysin TIA-1 isoform p40 DNA (ACTCCTTTTT) Kratky plot
Sample: Nucleolysin TIA-1 isoform p40 monomer, 21 kDa Homo sapiens protein
DNA (ACTCCTTTTT) monomer, 1 kDa DNA
Buffer: 20 mM HEPES, 100 mM NaCl, 3% v/v glycerol, pH: 7
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2016 May 27
TIA-1 RRM23 binding and recognition of target oligonucleotides. Nucleic Acids Res 45(8):4944-4957 (2017)
Waris S, García-Mauriño SM, Sivakumaran A, Beckham SA, Loughlin FE, Gorospe M, Díaz-Moreno I, Wilce MCJ, Wilce JA
RgGuinier 2.2 nm
Dmax 6.7 nm
VolumePorod 32 nm3

SASDBR7 – Subdomain SL2' of hepatitis C virus RNA domain 3'X at higher ionic strength

Subdomain SL2' of hepatitis C virus domain 3'X experimental SAS data
DAMMIN model
Sample: Subdomain SL2' of hepatitis C virus domain 3'X dimer, 36 kDa Hepatitis C virus RNA
Buffer: 10mM Tris 0,1mM EDTA 2mM MgCl2, pH: 7
Experiment: SAXS data collected at ...WAXS, Advanced Photon Source (APS), Argonne National Laboratory on 2015 Nov 11
Three-dimensional structure of the 3'X-tail of hepatitis C virus RNA in monomeric and dimeric states. RNA 23(9):1465-1476 (2017)
Cantero-Camacho Á, Fan L, Wang YX, Gallego J
RgGuinier 4.1 nm
Dmax 16.9 nm

SASDLQ3 – Interleukin 11, W168A mutant

Interleukin-11 (W168A) experimental SAS data
OTHER model
Sample: Interleukin-11 (W168A) monomer, 18 kDa Homo sapiens protein
Buffer: 20 mM Tris, 150 mM NaCl, 0.2% sodium azide, pH: 8.5
Experiment: SAXS data collected at ...WAXS, Australian Synchrotron on 2019 Nov 28
Structures of the interleukin 11 signalling complex reveal gp130 dynamics and the inhibitory mechanism of a cytokine variant Nature Communications 14(1) (2023)
Metcalfe R, Hanssen E, Fung K, Aizel K, Kosasih C, Zlatic C, Doughty L, Morton C, Leis A, Parker M, Gooley P, Putoczki T, Griffin M
RgGuinier 1.7 nm
Dmax 5.2 nm
VolumePorod 22 nm3

SASDF99 – ...WAXS coupled to multiangle laser and quasi-elastic light scattering (MALLS and QELS)

Bovine serum albumin experimental SAS data
GASBOR model
Sample: Bovine serum albumin monomer, 66 kDa Bos taurus protein
Buffer: 50 mM HEPES, 3% v/v glycerol,, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2017 Apr 23
Adding Size Exclusion Chromatography (SEC) and Light Scattering (LS) Devices to Obtain High-Quality Small Angle X-Ray Scattering (SAXS) Data Crystals 10(11):975 (2020)
Graewert M, Da Vela S, Gräwert T, Molodenskiy D, Blanchet C, Svergun D, Jeffries C
RgGuinier 2.8 nm
Dmax 8.3 nm
VolumePorod 95 nm3