SASBDB entries for UniProt ID:

SASDP64 – SALL4 Zinc Finger Cluster 4

UniProt ID: Q8BX22 (870-940) Sal-like protein 4
Sal-like protein 4 experimental SAS data
DAMMIN model
Sample: Sal-like protein 4 monomer, 8 kDa Mus musculus protein
Buffer: 20 mM Tris-HCl, pH 7.5, 200 mM NaCl, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Feb 6
Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome. Life Sci Alliance 6(3) (2023)
Watson JA, Pantier R, Jayachandran U, Chhatbar K, Alexander-Howden B, Kruusvee V, Prendecki M, Bird A, Cook AG
RgGuinier 2.1 nm
Dmax 5.8 nm
VolumePorod 11 nm3

SASDP84 – SALL4 Zinc Finger Cluster 4 bound to AT-rich DNA

UniProt ID: Q8BX22 (870-940) Sal-like protein 4

UniProt ID: None (None-None) AT-rich dsDNA
Sal-like protein 4AT-rich dsDNA experimental SAS data
OTHER model
Sample: Sal-like protein 4 monomer, 8 kDa Mus musculus protein
AT-rich dsDNA monomer, 7 kDa DNA
Buffer: 20 mM Tris-HCl, pH 7.5, 200 mM NaCl, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2020 Feb 6
Structure of SALL4 zinc finger domain reveals link between AT-rich DNA binding and Okihiro syndrome. Life Sci Alliance 6(3) (2023)
Watson JA, Pantier R, Jayachandran U, Chhatbar K, Alexander-Howden B, Kruusvee V, Prendecki M, Bird A, Cook AG
RgGuinier 1.8 nm
Dmax 5.1 nm
VolumePorod 14 nm3

SASDPC4 – Complex of Rhodopseudomonas palustris pAgo with TIR-like effector protein

UniProt ID: Q132Y4 (1-481) TIR domain-containing protein

UniProt ID: Q132Y5 (1-507) Uncharacterized protein (PIWI)
TIR domain-containing proteinUncharacterized protein (PIWI) experimental SAS data
ALPHAFOLD model
Sample: TIR domain-containing protein monomer, 57 kDa Rhodopseudomonas palustris (strain … protein
Uncharacterized protein (PIWI) monomer, 56 kDa Rhodopseudomonas palustris (strain … protein
Buffer: 20 mM Tris-HCl, pH8.0, 200 mM NaCl, 5 mM MgCl2, 2 mM β-mercaptoethanol, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Sep 27
Complex of Rhodopseudomonas palustris pAgo with TIR-like effector protein
Elena Manakova
RgGuinier 3.6 nm
Dmax 12.0 nm
VolumePorod 192 nm3

SASDPG4 – Alpha-1-acid glycoprotein at 283 K

UniProt ID: P02763 (19-183) Alpha-1-acid glycoprotein 1
Alpha-1-acid glycoprotein 1 experimental SAS data
PYMOL model
Sample: Alpha-1-acid glycoprotein 1 monomer, 22 kDa Homo sapiens protein
Buffer: phosphate buffered saline, pH: 7.4
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2021 Jan 12
SAXS data based glycosylated models of human alpha-1-acid glycorprotein, a key player in health, disease and drug circulation. J Biomol Struct Dyn :1-15 (2025)
Kalidas N, Peddada N, Pandey K, Ashish
RgGuinier 2.6 nm
Dmax 7.5 nm
VolumePorod 83 nm3

SASDPH4 – Alpha-1-glycoprotein at 343 K

UniProt ID: P02763 (19-183) Alpha-1-acid glycoprotein 1
Alpha-1-acid glycoprotein 1 experimental SAS data
PYMOL model
Sample: Alpha-1-acid glycoprotein 1 monomer, 22 kDa Homo sapiens protein
Buffer: phosphate buffered saline, pH: 7.4
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2021 Jan 12
SAXS data based glycosylated models of human alpha-1-acid glycorprotein, a key player in health, disease and drug circulation. J Biomol Struct Dyn :1-15 (2025)
Kalidas N, Peddada N, Pandey K, Ashish
RgGuinier 2.5 nm
Dmax 7.5 nm
VolumePorod 96 nm3

SASDPJ4 – N-terminal domain of EccA5

UniProt ID: P9WPI1 (1-278) ESX-5 secretion system protein EccA5
ESX-5 secretion system protein EccA5 experimental SAS data
DAMMIF model
Sample: ESX-5 secretion system protein EccA5 monomer, 31 kDa Mycobacterium tuberculosis (strain … protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 8
Experiment: SAXS data collected at BM29, ESRF on 2018 Mar 9
Structural and Biophysical characterization of N-terminal domain of EccA5 from Mycobacterium tuberculosis.
Jyoti Vishwakarma
RgGuinier 2.6 nm
Dmax 7.8 nm
VolumePorod 57 nm3

SASDPK4 – His-tagged RdfS Excisionase monomeric in solution

UniProt ID: Q7AL96 (None-None) DNA-binding protein
DNA-binding protein experimental SAS data
His-tagged RdfS Excisionase monomeric in solution Rg histogram
Sample: DNA-binding protein monomer, 13 kDa Mesorhizobium loti protein
Buffer: 150 mM Tris-HCl, 300 mM NaCl, 5% v/v glycerol, pH: 7.4
Experiment: SAXS data collected at SAXS/WAXS, Australian Synchrotron on 2019 Jun 19
Crystallographic and X-ray scattering study of RdfS, a recombination directionality factor from an integrative and conjugative element Acta Crystallographica Section D Structural Biology 78(10) (2022)
Verdonk C, Marshall A, Ramsay J, Bond C
RgGuinier 2.2 nm
Dmax 9.2 nm
VolumePorod 23 nm3

SASDPL4 – Human MUC2 mucin C-terminal dimer

UniProt ID: Q02817 (4356-5150) Human Mucin 2 C-terminal
Human Mucin 2 C-terminal experimental SAS data
DAMMIN model
Sample: Human Mucin 2 C-terminal dimer, 240 kDa Homo sapiens protein
Buffer: 25 mM HEPES, 100 mM NaCl, 10 mM CaCl2, pH: 7.4
Experiment: SAXS data collected at BM29, ESRF on 2020 Nov 20
The intestinal MUC2 mucin C-terminus is stabilized by an extra disulfide bond in comparison to von Willebrand factor and other gel-forming mucins Nature Communications 14(1) (2023)
Gallego P, Garcia-Bonete M, Trillo-Muyo S, Recktenwald C, Johansson M, Hansson G
RgGuinier 8.4 nm
Dmax 32.0 nm
VolumePorod 684 nm3

SASDPM4 – Apo SH2-SH3-SH2 domains from p120RasGAP

UniProt ID: P20936 (174-1047) Ras GTPase-activating protein 1
Ras GTPase-activating protein 1 experimental SAS data
DAMMIF model
Sample: Ras GTPase-activating protein 1 monomer, 101 kDa Homo sapiens protein
Buffer: 20 mM Tris pH 8 350 mM NaCl 1 mM DTT, pH: 8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Dec 12
Tandem engagement of phosphotyrosines by the dual SH2 domains of p120RasGAP. Structure (2022)
Stiegler AL, Vish KJ, Boggon TJ
RgGuinier 2.6 nm
Dmax 10.3 nm
VolumePorod 41 nm3

SASDPN4 – Doubly Phosphorylated p190RhoGAP Peptide Bound to p120RasGAP's SH2-SH3-SH2 Domains

UniProt ID: P20936 (174-1047) Ras GTPase-activating protein 1

UniProt ID: Q9NRY4 (1083-1111) Rho GTPase-activating protein 35
Ras GTPase-activating protein 1Rho GTPase-activating protein 35 experimental SAS data
DAMMIF model
Sample: Ras GTPase-activating protein 1 monomer, 101 kDa Homo sapiens protein
Rho GTPase-activating protein 35 monomer, 3 kDa Homo sapiens protein
Buffer: 20 mM Tris pH 8 350 mM NaCl 1 mM DTT, pH: 8
Experiment: SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Dec 11
Tandem engagement of phosphotyrosines by the dual SH2 domains of p120RasGAP. Structure (2022)
Stiegler AL, Vish KJ, Boggon TJ
RgGuinier 2.4 nm
Dmax 7.9 nm
VolumePorod 41 nm3