SASBDB entries for UniProt ID:

SASDBE9 – ABC transporter periplasmic substrate-binding protein TupA measured in the absence of metal ligand (tungstate or molybdate)

UniProt ID: Q316W1 (None-None) ABC transporter periplasmic substrate-binding protein
ABC transporter periplasmic substrate-binding protein experimental SAS data
SREFLEX model
Sample: ABC transporter periplasmic substrate-binding protein monomer, 30 kDa Desulfovibrio alaskensis protein
Buffer: 5 mM Tris-HCl, pH: 7.6
Experiment: SAXS data collected at BM29, ESRF on 2014 Jun 21
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20. Sci Rep 7(1):5798 (2017)
Otrelo-Cardoso AR, Nair RR, Correia MAS, Cordeiro RSC, Panjkovich A, Svergun DI, Santos-Silva T, Rivas MG
RgGuinier 2.4 nm
Dmax 9.5 nm
VolumePorod 49 nm3

SASDBF9 – ABC transporter periplasmic substrate-binding protein TupA measured in the presence of tungstate

UniProt ID: Q316W1 (None-None) ABC transporter periplasmic substrate-binding protein
ABC transporter periplasmic substrate-binding protein experimental SAS data
BUNCH model
Sample: ABC transporter periplasmic substrate-binding protein monomer, 30 kDa Desulfovibrio alaskensis protein
Buffer: 5 mM Tris-HCl, pH: 7.6
Experiment: SAXS data collected at EMBL P12, PETRA III on 2013 Dec 7
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20. Sci Rep 7(1):5798 (2017)
Otrelo-Cardoso AR, Nair RR, Correia MAS, Cordeiro RSC, Panjkovich A, Svergun DI, Santos-Silva T, Rivas MG
RgGuinier 2.3 nm
Dmax 9.0 nm
VolumePorod 46 nm3

SASDBG9 – ABC transporter periplasmic substrate-binding protein TupA measured in the presence of tungstate

UniProt ID: Q316W1 (None-None) ABC transporter periplasmic substrate-binding protein
ABC transporter periplasmic substrate-binding protein experimental SAS data
BUNCH model
Sample: ABC transporter periplasmic substrate-binding protein monomer, 30 kDa Desulfovibrio alaskensis protein
Buffer: 5 mM Tris-HCl, pH: 7.6
Experiment: SAXS data collected at BM29, ESRF on 2014 Jun 21
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20. Sci Rep 7(1):5798 (2017)
Otrelo-Cardoso AR, Nair RR, Correia MAS, Cordeiro RSC, Panjkovich A, Svergun DI, Santos-Silva T, Rivas MG
RgGuinier 2.3 nm
Dmax 8.9 nm
VolumePorod 44 nm3

SASDBH9 – ABC transporter periplasmic substrate-binding protein TupA measured in the presence of molybdate

UniProt ID: Q316W1 (None-None) ABC transporter periplasmic substrate-binding protein
ABC transporter periplasmic substrate-binding protein experimental SAS data
BUNCH model
Sample: ABC transporter periplasmic substrate-binding protein monomer, 30 kDa Desulfovibrio alaskensis protein
Buffer: 5 mM Tris-HCl, pH: 7.6
Experiment: SAXS data collected at EMBL P12, PETRA III on 2013 Dec 7
Highly selective tungstate transporter protein TupA from Desulfovibrio alaskensis G20. Sci Rep 7(1):5798 (2017)
Otrelo-Cardoso AR, Nair RR, Correia MAS, Cordeiro RSC, Panjkovich A, Svergun DI, Santos-Silva T, Rivas MG
RgGuinier 2.3 nm
Dmax 9.2 nm
VolumePorod 46 nm3

SASDBJ9 – Geobacillus stearothermophilus DnaB1-300

UniProt ID: A0A0K2H6I1 (1-300) Geobacillus stearothermophilus DnaB1-300
Geobacillus stearothermophilus DnaB1-300 experimental SAS data
GASBOR model
Sample: Geobacillus stearothermophilus DnaB1-300 tetramer, 138 kDa Geobacillus stearothermophilus protein
Buffer: 20 mM Tris, 300 mM NaCl and 5 mM β-ME, pH: 8
Experiment: SAXS data collected at 23A, Taiwan Photon Source, NSRRC on 2015 Oct 18
Structural analyses of the bacterial primosomal protein DnaB reveal that it is a tetramer and forms a complex with a primosomal re-initiation protein. J Biol Chem 292(38):15744-15757 (2017)
Li YC, Naveen V, Lin MG, Hsiao CD
RgGuinier 3.5 nm
Dmax 11.0 nm
VolumePorod 315 nm3

SASDBK9 – Geobacillus stearothermophilus DnaB full-length

UniProt ID: A0A0K2H6I1 (None-None) Geobacillus stearothermophilus DnaB full-length
Geobacillus stearothermophilus DnaB full-length experimental SAS data
GASBOR model
Sample: Geobacillus stearothermophilus DnaB full-length tetramer, 214 kDa Geobacillus stearothermophilus protein
Buffer: 20 mM Tris, 300 mM NaCl and 5 mM β-ME, pH: 8
Experiment: SAXS data collected at 23A, Taiwan Photon Source, NSRRC on 2015 Mar 12
Structural analyses of the bacterial primosomal protein DnaB reveal that it is a tetramer and forms a complex with a primosomal re-initiation protein. J Biol Chem 292(38):15744-15757 (2017)
Li YC, Naveen V, Lin MG, Hsiao CD
RgGuinier 5.7 nm
Dmax 20.0 nm
VolumePorod 432 nm3

SASDBL9 – Putative DNA binding protein YeeF-CT from Bacillus subtilis (amino acids 528-669)

UniProt ID: E0TU96 (528-669) Putative DNA binding protein
Putative DNA binding protein experimental SAS data
DAMMIN model
Sample: Putative DNA binding protein dimer, 37 kDa Bacillus subtilis subsp. … protein
Buffer: 20 mM HEPES 150 mM NaCl, pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2016 Aug 17
YeeF, a polymorphic toxin from Bacillus subtilis, is a ribosomal RNase with promiscuous DNA binding property
Krishan Gopal
RgGuinier 2.7 nm
Dmax 9.5 nm
VolumePorod 55 nm3

SASDBM9 – YezG: a cognate immunity protein of YeeF from Bacillus subtilis

UniProt ID: E0TU95 (None-None) YezG, cognate immunity protein of YeeF
YezG, cognate immunity protein of YeeF experimental SAS data
DAMMIN model
Sample: YezG, cognate immunity protein of YeeF monomer, 19 kDa Bacillus subtilis subsp. … protein
Buffer: 20 mM HEPES 150 mM NaCl, pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2016 Aug 17
YeeF, a polymorphic toxin from Bacillus subtilis, is a ribosomal RNase with promiscuous DNA binding property
Krishan Gopal
RgGuinier 2.1 nm
Dmax 6.1 nm
VolumePorod 46 nm3

SASDBN9 – Putative DNA binding protein YeeF-CT in complex with the cognate immunity protein YezG from Bacillus subtilis

UniProt ID: E0TU96 (None-None) Putative DNA binding protein

UniProt ID: E0TU95 (None-None) YezG, cognate immunity protein of YeeF
Putative DNA binding proteinYezG, cognate immunity protein of YeeF experimental SAS data
DAMMIN model
Sample: Putative DNA binding protein dimer, 37 kDa Bacillus subtilis subsp. … protein
YezG, cognate immunity protein of YeeF monomer, 19 kDa Bacillus subtilis subsp. … protein
Buffer: 20 mM HEPES 150 mM NaCl, pH: 7.5
Experiment: SAXS data collected at Anton Paar SAXSpace, CSIR - Institute of Microbial Technology (IMTech) on 2016 Aug 18
YeeF, a polymorphic toxin from Bacillus subtilis, is a ribosomal RNase with promiscuous DNA binding property
Krishan Gopal
RgGuinier 4.0 nm
Dmax 14.1 nm
VolumePorod 115 nm3

SASDBP9 – Human Hsp90 co-chaperone Cdc37 protein (CD37)

UniProt ID: Q16543 (None-None) Hsp90 co-chaperone Cdc37
Hsp90 co-chaperone Cdc37 experimental SAS data
CORAL model
Sample: Hsp90 co-chaperone Cdc37 monomer, 44 kDa Homo sapiens protein
Buffer: 25 mM Tris.Cl, 150 mM NaCl, 5% (v/v) glycerol, 1 mM TCEP, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2016 Jul 10
Disease Variants of FGFR3 Reveal Molecular Basis for the Recognition and Additional Roles for Cdc37 in Hsp90 Chaperone System. Structure 26(3):446-458.e8 (2018)
Bunney TD, Inglis AJ, Sanfelice D, Farrell B, Kerr CJ, Thompson GS, Masson GR, Thiyagarajan N, Svergun DI, Williams RL, Breeze AL, Katan M
RgGuinier 4.0 nm
Dmax 15.5 nm
VolumePorod 106 nm3