Small Angle Scattering Biological Data Bank SASBDB

SASBDB entries for UniProt ID:

SASDVS7 – Cadherin EGF LAG seven-pass G-type receptor 1 (CELSR1) ECR without calcium

UniProt ID: O35161 (255-2477) Cadherin EGF LAG seven-pass G-type receptor 1

Cadherin EGF LAG seven-pass G-type receptor 1 experimental SAS data

Cadherin EGF LAG seven-pass G-type receptor 1 Kratky plot

Sample:	Cadherin EGF LAG seven-pass G-type receptor 1 monomer, 245 kDa Mus musculus protein
Buffer:	10 mM Tris, 150 mM NaCl, pH: 8.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Dec 8

Structural basis for regulation of CELSR1 by a compact module in its extracellular region. Nat Commun 16(1):3972 (2025)
Bandekar SJ, Garbett K, Kordon SP, Dintzner EE, Li J, Shearer T, Sando RC, Araç D

R_g^Guinier	6.0	nm
D_max	22.5	nm
Volume^Porod	473	nm³

SASDVT7 – Cadherin EGF LAG seven-pass G-type receptor 1 (CELSR1) ECR with calcium

UniProt ID: O35161 (255-2477) Cadherin EGF LAG seven-pass G-type receptor 1

Sample:	Cadherin EGF LAG seven-pass G-type receptor 1 dimer, 491 kDa Mus musculus protein
Buffer:	10 mM Tris, 150 mM NaCl, 1 mM CaCl2, pH: 8.5
Experiment:	SAXS data collected at BioCAT 18ID, Advanced Photon Source (APS), Argonne National Laboratory on 2022 Dec 8

R_g^Guinier	16.2	nm
D_max	67.5	nm
Volume^Porod	722	nm³

SASDVU7 – Ca2+/calmodulin-dependent protein kinase II (CaMKII) holoenzyme with Exon 14 as the linker region

UniProt ID: Q9UQM7 (7-478) Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ329-344)

Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ329-344) experimental SAS data

Sample:	Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ329-344) dodecamer, 620 kDa Homo sapiens protein
Buffer:	25 mM tris-HCl pH 8.8, 250 mM KCl, 1 mM TCEP, 2% glycerol, pH:
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2023 Apr 17

A domain-swapped CaMKII conformation facilitates linker-mediated allosteric regulation
Bao Nguyen Viet

R_g^Guinier	6.8	nm
D_max	25.7	nm
Volume^Porod	1437	nm³

SASDVV7 – Ca2+/calmodulin-dependent protein kinase II (CaMKII) holoenzyme with Exon 18 as the linker region

UniProt ID: Q9UQM7 (7-478) Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ 316-329)

Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ 316-329) experimental SAS data

Sample:	Calcium/calmodulin-dependent protein kinase type II subunit alpha (Δ1-6; Q223K; Δ 316-329) dodecamer, 626 kDa Homo sapiens protein
Buffer:	25 mM tris-HCl pH 8.8, 250 mM KCl, 1 mM TCEP, 2% glycerol, pH:
Experiment:	SAXS data collected at 12.3.1 (SIBYLS), Advanced Light Source (ALS) on 2023 Apr 17

A domain-swapped CaMKII conformation facilitates linker-mediated allosteric regulation
Bao Nguyen Viet

R_g^Guinier	6.0	nm
D_max	19.0	nm
Volume^Porod	1080	nm³

SASDVC8 – Hendra virus protein P/V/W PNT3 domain

UniProt ID: P0C1C6 (200-310) Protein W

Hendra virus protein P/V/W PNT3 domain Rg histogram

Sample:	Protein W monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at BM29, ESRF on 2023 Jun 13

Unraveling the molecular grammar and the structural transitions underlying the fibrillation of a viral fibrillogenic domain. Protein Sci 34(3):e70068 (2025)
Gondelaud F, Leval J, Arora L, Walimbe A, Bignon C, Ptchelkine D, Brocca S, Mukhopadyay S, Longhi S

R_g^Guinier	3.4	nm
D_max	13.5	nm
Volume^Porod	42	nm³

SASDVD8 – Hendra virus protein P/V/W PNT3 low-K domain

UniProt ID: None (200-310) Protein W (artificial PNT3 variant - low-kappa)

Protein W (artificial PNT3 variant - low-kappa) experimental SAS data

Hendra virus protein P/V/W PNT3 low-K domain Rg histogram

Sample:	Protein W (artificial PNT3 variant - low-kappa) monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at BM29, ESRF on 2023 Jun 13

R_g^Guinier	3.8	nm
D_max	18.0	nm
Volume^Porod	48	nm³

SASDVE8 – Hendra virus protein P/V/W PNT3 high-K domain

UniProt ID: None (200-310) Protein W (artificial PNT3 variant - high-kappa)

Protein W (artificial PNT3 variant - high-kappa) experimental SAS data

Hendra virus protein P/V/W PNT3 high-K domain Rg histogram

Sample:	Protein W (artificial PNT3 variant - high-kappa) monomer, 15 kDa Hendra virus (isolate … protein
Buffer:	20 mM HEPES, 150 mM NaCl, pH: 7.2
Experiment:	SAXS data collected at SWING, SOLEIL on 2024 Apr 5

R_g^Guinier	3.1	nm
D_max	14.7	nm
Volume^Porod	54	nm³

SASDVF8 – S9 peptidase form Mycobacterium phlei (8 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

Structural and Functional Investigation of Putative Peptidase from Mycolicibacterium phlei : An Exclusive Endopeptidase among S9C Subfamily Biochemistry (2025)
Chandravanshi K, Jamdar S, Singh R, Kumar A, Mahato A, Agrawal R, Kumar S, Kumar A, Makde R

R_g^Guinier	5.2	nm
D_max	15.8	nm
Volume^Porod	559	nm³

SASDVG8 – S9 peptidase form Mycobacterium phlei (6 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

R_g^Guinier	5.0	nm
D_max	15.7	nm
Volume^Porod	546	nm³

SASDVH8 – S9 peptidase form Mycobacterium phlei (4 mg/ml)

UniProt ID: A0A5N5URA7 (4-661) Peptidase S9

Sample:	Peptidase S9 tetramer, 304 kDa Mycolicibacterium phlei DSM … protein
Buffer:	10 mM Tris-HCl, 135 mM NaCl, pH: 8
Experiment:	SAXS data collected at BL-18, INDUS-2 on 2024 Mar 21

R_g^Guinier	5.1	nm
D_max	16.2	nm
Volume^Porod	563	nm³

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