Browse by DISSEMINATION: Published

SASDUJ9 – Mononuclear iron bound form of human ISCA1 under 180 mT magnetic field for 60 min

Human Iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Human Iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Human Iron-sulfur cluster assembly 1 homolog, mitochondrial, 14 kDa Homo sapiens protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2023 Dec 1
A hidden property of the iron-sulfur protein in the mononuclear iron-bound state: species-dependent structural ordering induced by magnetic fields. FEBS J (2025)
Arai S, Soga S, Hirai M, Kobayashi R, Masai H, Kimura K, Maeda K, Nagashima H
RgGuinier 3.0 nm
Dmax 11.2 nm
VolumePorod 66 nm3

SASDUK9 – Iron-free pigeon ISCA1 under 180mT magnetic field for 60 min

Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Nov 1
A hidden property of the iron-sulfur protein in the mononuclear iron-bound state: species-dependent structural ordering induced by magnetic fields. FEBS J (2025)
Arai S, Soga S, Hirai M, Kobayashi R, Masai H, Kimura K, Maeda K, Nagashima H
RgGuinier 3.9 nm

SASDVA3 – Iron-free pigeon ISCA1 under geomagnetic field

Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial Kratky plot
Sample: Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Nov 1
A hidden property of the iron-sulfur protein in the mononuclear iron-bound state: species-dependent structural ordering induced by magnetic fields. FEBS J (2025)
Arai S, Soga S, Hirai M, Kobayashi R, Masai H, Kimura K, Maeda K, Nagashima H
RgGuinier 3.6 nm

SASDVB3 – Mononuclear iron bound form of pigeon ISCA1 under geomagnetic condition

Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial experimental SAS data
DAMMIN model
Sample: Pigeon iron-sulfur cluster assembly 1 homolog, mitochondrial, 15 kDa Columba livia protein
Buffer: 20 mM Tris-HCl, 0.15 M NaCl, 10 mM 3-mercapto-1,2-propanediol, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2021 Jun 8
A hidden property of the iron-sulfur protein in the mononuclear iron-bound state: species-dependent structural ordering induced by magnetic fields. FEBS J (2025)
Arai S, Soga S, Hirai M, Kobayashi R, Masai H, Kimura K, Maeda K, Nagashima H
RgGuinier 2.7 nm
Dmax 7.2 nm
VolumePorod 39 nm3

SASDY43 – Bovine serum albumin (BSA) at neutral pH

Bovine serum albumin experimental SAS data
GASBOR model
Sample: Bovine serum albumin monomer, 67 kDa Bos taurus protein
Buffer: 10 mM PBS, 138 mM NaCl, pH: 7.3
Experiment: SAXS data collected at 4C, Pohang Accelerator Laboratory on 2024 Mar 5
Structural Characterization of Urea-Induced BSA Denaturation Using Size-Exclusion Chromatography Coupled with Small-Angle X-ray Scattering. J Phys Chem B (2025)
Maliki SK, Kim JH, Chung M, Jin KS
RgGuinier 2.7 nm
Dmax 8.0 nm
VolumePorod 98 nm3

SASDX24 – Ovorubin from the golden apple snail (Pomacea canaliculata)

Perivitellin ovorubin-1Perivitellin ovorubin-2Uncharacterized protein (ovorubin-3, short)Perivitellin protein (ovorubin-4, form 1)Uncharacterized protein (ovorubin-5) experimental SAS data
PHENIX model
Sample: Perivitellin ovorubin-1 dimer, 41 kDa Pomacea canaliculata protein
Perivitellin ovorubin-2 dimer, 42 kDa Pomacea canaliculata protein
Uncharacterized protein (ovorubin-3, short) dimer, 40 kDa Pomacea canaliculata protein
Perivitellin protein (ovorubin-4, form 1) dimer, 40 kDa Pomacea canaliculata protein
Uncharacterized protein (ovorubin-5) dimer, 41 kDa Pomacea canaliculata protein
Buffer: 20 mM Tris, 150 mM NaCl, pH: 7
Experiment: SAXS data collected at TPS13A, NSRRC on 2025 Mar 26
Structure of the chromoprotein ovorubin from the golden apple snail ( Pomacea canaliculata ) Protein Science 35(1) (2025)
Wilasluck P, Saw W, Tran B, Sabat G, Shih O, Hengphasatporn K, Shigeta Y, Vinayavekhin N, Wangkanont K
RgGuinier 4.1 nm
Dmax 12.4 nm
VolumePorod 400 nm3

SASDYY3 – Influenza A virus Nuclear export protein NEP/NS2

Nuclear export protein experimental SAS data
DAMMIN model
Sample: Nuclear export protein monomer, 14 kDa Influenza A virus … protein
Buffer: 20 mM HEPES, 300 mM NaCl, pH: 7.5
Experiment: SAXS data collected at SWING, SOLEIL on 2020 Jul 9
Monomeric Structure of Influenza A Virus NEP/NS2 Obtained With an Artificial Protein Highlights Conformational Plasticity. J Mol Biol 437(24):169511 (2025)
Stelfox AJ, Bessonne M, Bourhis JM, Erba EB, Albanese P, Compte DP, Nevers Q, Urvoas A, Valerio-Lepiniec M, Minard P, Ruigrok RWH, Crépin T, Delmas B, Ballandras-Colas A
RgGuinier 1.9 nm
Dmax 6.0 nm
VolumePorod 24 nm3

SASDV23 – N-terminal domain construct of hsGEFH1_28-582aa fit to various models

Isoform 1 of Rho guanine nucleotide exchange factor 2 experimental SAS data
MODELLER model
Sample: Isoform 1 of Rho guanine nucleotide exchange factor 2 monomer, 64 kDa Homo sapiens protein
Buffer: 20mM Tris-Cl, 150mM NaCl, 1mM DTT, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 19
Structural basis of microtubule-mediated signal transduction. Cell (2025)
Choi SR, Blum TB, Giono M, Roy B, Vakonakis I, Schmid D, Oelgarth N, Ranganathan A, Gossert AD, Shivashankar GV, Zippelius A, Steinmetz MO
RgGuinier 3.7 nm

SASDV33 – N-terminal domain construct of hsGEFH1_190-582aa fit to DAMMIF and Alphafold2 models

Isoform 1 of Rho guanine nucleotide exchange factor 2 experimental SAS data
ALPHAFOLD model
Sample: Isoform 1 of Rho guanine nucleotide exchange factor 2 monomer, 47 kDa Homo sapiens protein
Buffer: 20mM Tris-Cl, 150mM NaCl, 1mM DTT, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 19
Structural basis of microtubule-mediated signal transduction. Cell (2025)
Choi SR, Blum TB, Giono M, Roy B, Vakonakis I, Schmid D, Oelgarth N, Ranganathan A, Gossert AD, Shivashankar GV, Zippelius A, Steinmetz MO
RgGuinier 5.9 nm

SASDV43 – N-terminal domain construct of hsGEFH1_28-582aa fit to DAMMIF model and EOM

Isoform 1 of Rho guanine nucleotide exchange factor 2 experimental SAS data
N-terminal domain construct of hsGEFH1_28-582aa fit to DAMMIF model and EOM Rg histogram
Sample: Isoform 1 of Rho guanine nucleotide exchange factor 2 monomer, 64 kDa Homo sapiens protein
Buffer: 20mM Tris-Cl, 150mM NaCl, 1mM DTT, pH: 7.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 19
Structural basis of microtubule-mediated signal transduction. Cell (2025)
Choi SR, Blum TB, Giono M, Roy B, Vakonakis I, Schmid D, Oelgarth N, Ranganathan A, Gossert AD, Shivashankar GV, Zippelius A, Steinmetz MO
RgGuinier 3.7 nm