Browse by DISSEMINATION: Published

SASDZ74 – ABC transporter TM287/288 heterodimer in complex with nanobody Nb_TM#1

ABC transporter TM288 subunitABC transporter, ATP-binding proteinNanobody Nb_TM#1 bound to TM287/288 ABC transporter experimental SAS data
ABC transporter TM288 subunit ABC transporter, ATP-binding protein Nanobody Nb_TM#1 bound to TM287/288 ABC transporter Kratky plot
Sample: ABC transporter TM288 subunit monomer, 68 kDa Thermotoga maritima (strain … protein
ABC transporter, ATP-binding protein monomer, 64 kDa ABC transporter TM287 … protein
Nanobody Nb_TM#1 bound to TM287/288 ABC transporter monomer, 14 kDa Vicugna pacos (alpaca)
Buffer: 20 mM HEPES, 200 mM NaCl, 5 mM MgCl2, 20 μM DMM, 1 mM Mg2+ ATP, pH: 7.6
Experiment: SAXS data collected at EMBL P12, PETRA III on 2021 Sep 10
Capturing transient states of heterodimeric ABC transporter TM287/288 by Time-Resolved Small-Angle X-ray Scattering. Biophys J (2026)
Schröder L, De Vecchis D, Gruzinov A, Schäfer LV, Blanchet CE, Seeger MA, Tidow H, Josts I
RgGuinier 5.4 nm

SASDZ84 – ABC transporter TM287/288 heterodimer in presence of Sybody Sb#35

ABC transporter TM288 subunitABC transporter, ATP-binding proteinSynthetic nanobody Sb_TM#35 bound to TM287/288 ABC transporter experimental SAS data
ABC transporter TM288 subunit ABC transporter, ATP-binding protein Synthetic nanobody Sb_TM#35 bound to TM287/288 ABC transporter Kratky plot
Sample: ABC transporter TM288 subunit monomer, 68 kDa Thermotoga maritima (strain … protein
ABC transporter, ATP-binding protein monomer, 64 kDa ABC transporter TM287 … protein
Synthetic nanobody Sb_TM#35 bound to TM287/288 ABC transporter monomer, 14 kDa synthetic (in vitro …
Buffer: 20 mM HEPES, 200 mM NaCl, 5 mM MgCl2, 20 μM DMM, 1 mM Mg2+ ATP, pH: 7.6
Experiment: SAXS data collected at EMBL P12, PETRA III on 2023 Jun 6
Capturing transient states of heterodimeric ABC transporter TM287/288 by Time-Resolved Small-Angle X-ray Scattering. Biophys J (2026)
Schröder L, De Vecchis D, Gruzinov A, Schäfer LV, Blanchet CE, Seeger MA, Tidow H, Josts I
RgGuinier 5.4 nm

SASDUP4 – Dimer of the N-terminal 50 residues of the H-NS family protein MvaT

H-NS family protein MvaT experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: H-NS family protein MvaT dimer, 12 kDa Pseudomonas putida (strain … protein
Buffer: 20 mM Tris-HCl, 500 mM NaCl, 10% glycerol, 500 mM Imidazole, pH: 8
Experiment: SAXS data collected at BL-10C, Photon Factory (PF), High Energy Accelerator Research Organization (KEK) on 2019 May 24
Structural characterization of the native oligomerization mode of MvaT proteins in Pseudomonas. Microbiol Spectr :e0023526 (2026)
Vasileva D, Suzuki-Minakuchi C, Arakawa T, Moriwaki Y, Yonezawa K, Shimizu N, Fujimoto Z, Terada T, Okada K, Nojiri H
RgGuinier 2.9 nm
Dmax 14.0 nm

SASDYF4 – Mutant Elongation Factor Like-1 protein

Mutated ribosome assembly protein 1 (R1086Q) with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) experimental SAS data
Mutated ribosome assembly protein 1 (R1086Q) with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) Kratky plot
Sample: Mutated ribosome assembly protein 1 (R1086Q) with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) monomer, 127 kDa Saccharomyces cerevisiae protein
Buffer: 50 mM HEPES, 300 mM NaCl, 5 mM MgCl2, 5% glycerol, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Oct 3
Hydroxyl radical footprinting modification reveals an intradomain communication pathway in EFL1 disrupted by a Shwachman-Diamond syndrome-associated mutation. Protein Sci 35(4):e70504 (2026)
Zúñiga-Domínguez JA, Jain R, González-Andrade M, Farquhar ER, Chance MR, Gijsbers A, Sánchez-Puig N
RgGuinier 4.7 nm
Dmax 15.2 nm
VolumePorod 314 nm3

SASDYG4 – Yeast Elongation Factor like-1 protein (EFL1)

Ribosome assembly protein 1 with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) experimental SAS data
Ribosome assembly protein 1 with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) Kratky plot
Sample: Ribosome assembly protein 1 with C-terminal tag (RSRSGSENLYFQGSHHHHHHHH) monomer, 127 kDa Saccharomyces cerevisiae protein
Buffer: 50 mM HEPES, 300 mM NaCl, 5 mM MgCl2, 5% glycerol, pH: 8
Experiment: SAXS data collected at B21, Diamond Light Source on 2024 Oct 3
Hydroxyl radical footprinting modification reveals an intradomain communication pathway in EFL1 disrupted by a Shwachman-Diamond syndrome-associated mutation. Protein Sci 35(4):e70504 (2026)
Zúñiga-Domínguez JA, Jain R, González-Andrade M, Farquhar ER, Chance MR, Gijsbers A, Sánchez-Puig N
RgGuinier 4.6 nm
Dmax 15.7 nm
VolumePorod 368 nm3

SASDX64 – Carboxylic ester hydrolase FphE

Uncharacterized hydrolase SAUSA300_2518 experimental SAS data
SREFLEX model
Sample: Uncharacterized hydrolase SAUSA300_2518 dimer, 62 kDa Staphylococcus aureus (strain … protein
Buffer: 10 mM HEPES, 50 mM NaCl, 0.1% w/v NaN3, pH: 7.5
Experiment: SAXS data collected at BioSAXS, Australian Synchrotron on 2025 Mar 26
Unique structural and ligand-binding properties of the Staphylococcus aureus serine hydrolase FphE Proceedings of the National Academy of Sciences 123(13) (2026)
Jo J, Upadhyay T, You X, Bennett J, Lee H, Bogyo M, Fellner M
RgGuinier 3.0 nm
Dmax 10.0 nm
VolumePorod 84 nm3

SASDX74 – Carboxylic ester hydrolase FphF

S-formylglutathione hydrolase experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: S-formylglutathione hydrolase dimer, 59 kDa Staphylococcus aureus (strain … protein
Buffer: 10 mM HEPES, 50 mM NaCl, 0.1% w/v NaN3, pH: 7.5
Experiment: SAXS data collected at BioSAXS, Australian Synchrotron on 2025 Mar 26
Unique structural and ligand-binding properties of the Staphylococcus aureus serine hydrolase FphE Proceedings of the National Academy of Sciences 123(13) (2026)
Jo J, Upadhyay T, You X, Bennett J, Lee H, Bogyo M, Fellner M
RgGuinier 2.8 nm
Dmax 9.3 nm
VolumePorod 99 nm3

SASDV63 – B2 SINE ribozyme wildtype

B2 short interspaced nuclear element (SINE) RNA experimental SAS data
DAMMIN model
Sample: B2 short interspaced nuclear element (SINE) RNA monomer, 57 kDa Mus musculus RNA
Buffer: 5 mM Tris-HCl, 10 mM NaCl, 0.01% NP-40, 0.02 mM EDTA, 0.2 mM DTT, 0.5 mM MgCl2 and 1.5 % Glycerol, pH: 7.9
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Feb 20
Cleavage region organizes the structural architecture of the SINE-derived B2 repressive ribozyme. Commun Biol (2026)
Singhal A, Mrozowich T, Rivera C, Chaudhury SN, Xu L, Aguilar R, Badmalia M, Lee JT, Patel TR, Sanbonmatsu KY
RgGuinier 5.4 nm
Dmax 17.3 nm
VolumePorod 131 nm3

SASDV73 – B2 SINE ribozyme with deletion mutation 81-124

B2 short interspaced nuclear element (SINE) RNA with deletion mutation 81-124 experimental SAS data
DAMMIF model
Sample: B2 short interspaced nuclear element (SINE) RNA with deletion mutation 81-124 dimer, 86 kDa Mus musculus RNA
Buffer: 5 mM Tris-HCl, 10 mM NaCl, 0.01% NP-40, 0.02 mM EDTA, 0.2 mM DTT, 0.5 mM MgCl2 and 1.5 % Glycerol, pH: 7.9
Experiment: SAXS data collected at B21, Diamond Light Source on 2023 Aug 19
Cleavage region organizes the structural architecture of the SINE-derived B2 repressive ribozyme. Commun Biol (2026)
Singhal A, Mrozowich T, Rivera C, Chaudhury SN, Xu L, Aguilar R, Badmalia M, Lee JT, Patel TR, Sanbonmatsu KY
RgGuinier 8.1 nm
Dmax 22.1 nm

SASDV83 – B2 SINE ribozyme with deletion mutation 96-105

B2 short interspaced nuclear element (SINE) RNA with deletion mutation 96-105 experimental SAS data
DAMMIN model
Sample: B2 short interspaced nuclear element (SINE) RNA with deletion mutation 96-105 monomer, 54 kDa Mus musculus RNA
Buffer: 5 mM Tris-HCl, 10 mM NaCl, 0.01% NP-40, 0.02 mM EDTA, 0.2 mM DTT, 0.5 mM MgCl2 and 1.5 % Glycerol, pH: 7.9
Experiment: SAXS data collected at B21, Diamond Light Source on 2021 Dec 18
Cleavage region organizes the structural architecture of the SINE-derived B2 repressive ribozyme. Commun Biol (2026)
Singhal A, Mrozowich T, Rivera C, Chaudhury SN, Xu L, Aguilar R, Badmalia M, Lee JT, Patel TR, Sanbonmatsu KY
RgGuinier 5.5 nm
Dmax 17.5 nm
VolumePorod 135 nm3