Small Angle Scattering Biological Data Bank SASBDB

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SASDKE8 – LuxR family transcriptional regulator, SmcR N55I mutant

LuxR family transcriptional regulator, N55I experimental SAS data

Sample:	LuxR family transcriptional regulator, N55I, 52 kDa Vibrio vulnificus protein
Buffer:	200 mM NaCl, 25 mM Tris, 1 mM DTT, 0.5 mM EDTA, pH: 7.5
Experiment:	SAXS data collected at 12-ID-B SAXS/WAXS, Advanced Photon Source (APS), Argonne National Laboratory on 2020 Dec 11

The DNA binding domain of the Vibrio vulnificus SmcR transcription factor is flexible and binds diverse DNA sequences. Nucleic Acids Res 49(10):5967-5984 (2021)
Newman JD, Russell MM, Fan L, Wang YX, Gonzalez-Gutierrez G, van Kessel JC

R_g^Guinier	3.0	nm
D_max	10.1	nm
Volume^Porod	45	nm³

SASDPG8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 2.6

M18D170V209D170M18 experimental SAS data

Sample:	M18D170V209D170M18 monomer, 1 kDa
Buffer:	H20, pH: 2.6
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5

Highly Tunable Nanostructures in a Doubly pH‐Responsive Pentablock Terpolymer in Solution and in Thin Films Advanced Functional Materials 31(32):2102905 (2021)
Jung F, Schart M, Bührend L, Meidinger E, Kang J, Niebuur B, Ariaee S, Molodenskiy D, Posselt D, Amenitsch H, Tsitsilianis C, Papadakis C

R_g^Guinier

8.7

SASDPH8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 5.0

Sample:	M18D170V209D170M18 monomer, 1 kDa
Buffer:	H2O, pH: 5
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5

R_g^Guinier

8.2

SASDPJ8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 6.9

Sample:	M18D170V209D170M18 monomer, 1 kDa
Buffer:	H2O, pH: 6.9
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5

R_g^Guinier

5.4

SASDPK8 – Solution of 0.1 wt% pentablock terpolymer (M18D170V209D170M18) in water at pH 8.9

Sample:	M18D170V209D170M18 monomer, 1 kDa
Buffer:	H2O, pH: 8.9
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2020 Dec 5

R_g^Guinier

7.3

SASDL62 – The truncated RTX domain of adenylate cyclase toxin CyaA - construct RTX-1 (amino acids 1132-1294 and 1562-1681 of CyaA)

hybrid RTX-1 construct (amino acids 1132-1294 and 1562-1681 of CyaA) experimental SAS data

Sample:	Hybrid RTX-1 construct (amino acids 1132-1294 and 1562-1681 of CyaA) monomer, 30 kDa Bordetella pertussis protein
Buffer:	10 mM Tris HCl, 150 mM NaCl, 10 mM CaCl₂, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2016 Dec 1

Almost half of the RTX domain is dispensable for complement receptor 3 binding and cell-invasive activity of the adenylate cyclase toxin. J Biol Chem :100833 (2021)
Espinosa-Vinals CA, Masin J, Holubova J, Stanek O, Jurnecka D, Osicka R, Sebo P, Bumba L

R_g^Guinier	2.4	nm
D_max	8.2	nm
Volume^Porod	41	nm³

SASDL72 – The truncated RTX domain of adenylate cyclase toxin CyaA - construct RTX-2 (amino acids 1132-1303 and 1562-1681 of CyaA)

hybrid RTX-2 construct (amino acids 1132-1303 and 1562-1681 of CyaA) experimental SAS data

Sample:	Hybrid RTX-2 construct (amino acids 1132-1303 and 1562-1681 of CyaA) monomer, 31 kDa Bordetella pertussis protein
Buffer:	10 mM Tris HCl, 150 mM NaCl, 10 mM CaCl₂, pH: 8
Experiment:	SAXS data collected at EMBL P12, PETRA III on 2016 Dec 1

R_g^Guinier	2.3	nm
D_max	8.0	nm
Volume^Porod	37	nm³

SASDKZ6 – SAXS data for the complex of the sensory rhodopsin II with its cognate truncated transducer in detergent at 0.15 M NaCl

Sensory rhodopsin II from Natronbacterium pharaonisTruncated sensory rhodopsin II transducer containing transmembrane and HAMP1 domains experimental SAS data

Sample:	Sensory rhodopsin II from Natronbacterium pharaonis dimer, 53 kDa Natronomonas pharaonis protein Truncated sensory rhodopsin II transducer containing transmembrane and HAMP1 domains dimer, 30 kDa Natronomonas pharaonis protein
Buffer:	150 mM NaCl, 25 Na/K-Pi, 1 mM EDTA, 0.05 % DDM, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2018 Dec 13

Molecular model of a sensor of two-component signaling system Scientific Reports 11(1) (2021)
Ryzhykau Y, Orekhov P, Rulev M, Vlasov A, Melnikov I, Volkov D, Nikolaev M, Zabelskii D, Murugova T, Chupin V, Rogachev A, Gruzinov A, Svergun D, Brennich M, Gushchin I, Soler-Lopez M, Bothe A, Büldt G, Leonard G, Engelhard M, Kuklin A, Gordeliy V

R_g^Guinier	4.8	nm
D_max	14.0	nm

SASDK27 – SAXS data for the sensory rhodopsin II / transducer complex in detergent at 0.15 M NaCl

Sensory rhodopsin II from Natronbacterium pharaonisSensory rhodopsin II transducer from Natronomonas pharaonis experimental SAS data

Sample:	Sensory rhodopsin II from Natronbacterium pharaonis dimer, 53 kDa Natronomonas pharaonis protein Sensory rhodopsin II transducer from Natronomonas pharaonis dimer, 116 kDa Natronomonas pharaonis protein
Buffer:	150 mM NaCl, 25 mM Na/Na-Pi, 1.0 mM EDTA, 0.05% DDM, pH: 8
Experiment:	SAXS data collected at BM29, ESRF on 2018 Jul 9

R_g^Guinier	9.0	nm
D_max	38.9	nm

SASDK37 – SANS data for the sensory rhodopsin II / transducer complex in detergent at 0.15 M NaCl

Sample:	Sensory rhodopsin II from Natronbacterium pharaonis dimer, 53 kDa Natronomonas pharaonis protein Sensory rhodopsin II transducer from Natronomonas pharaonis dimer, 116 kDa Natronomonas pharaonis protein
Buffer:	150 mM NaCl, 25 mM Na/Na-Pi, 1.0 mM EDTA, 0.05% DDM (D2O buffer), pH: 8
Experiment:	SANS data collected at YuMO SANS TOF spectrometer, IBR-2, Frank Laboratory of Neutron Physics, Joint Institute for Nuclear Research on 2019 Jan 25

R_g^Guinier	7.1	nm
D_max	35.0	nm

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