Browse by MODEL: Hybrid

SASDH64 – Plasmodium falciparum myosin essential light chain, N-terminal domain

Myosin essential light chain experimental SAS data
PYMOL model
Sample: Myosin essential light chain monomer, 9 kDa Plasmodium falciparum protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2018 Oct 25
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 1.4 nm
Dmax 4.3 nm
VolumePorod 12 nm3

SASDH94 – Toxoplasma gondii myosin essential light chain 2 (TgELC2) bound to myosin A C-terminus

Myosin essential light chain 2Myosin A experimental SAS data
PYMOL model
Sample: Myosin essential light chain 2 monomer, 15 kDa Toxoplasma gondii protein
Myosin A monomer, 3 kDa Toxoplasma gondii protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Apr 8
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 1.7 nm
Dmax 5.5 nm
VolumePorod 28 nm3

SASDHA4 – Trimeric complex of myosin A with myosin light chain (MLC1) and essential light chain (TgELC1) from Toxoplasma gondii

Toxoplasma gondii essential light chain 1Myosin AToxoplasma gondii myosin light chain, full length experimental SAS data
PYMOL model
Sample: Toxoplasma gondii essential light chain 1 monomer, 15 kDa Toxoplasma gondii protein
Myosin A monomer, 5 kDa Toxoplasma gondii protein
Toxoplasma gondii myosin light chain, full length monomer, 24 kDa Toxoplasma gondii protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Sep 30
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 3.2 nm
Dmax 14.0 nm
VolumePorod 69 nm3

SASDHB4 – Trimeric complex of myosin A with myosin light chain (MLC1, residues 66-210) and essential light chain (TgELC1) from Toxoplasma gondii

Myosin light chain TgMLC1, residues 66-210Toxoplasma gondii essential light chain 1Myosin A experimental SAS data
PYMOL model
Sample: Myosin light chain TgMLC1, residues 66-210 monomer, 17 kDa Toxoplasma gondii protein
Toxoplasma gondii essential light chain 1 monomer, 15 kDa Toxoplasma gondii protein
Myosin A monomer, 5 kDa Toxoplasma gondii protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Sep 30
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 2.7 nm
Dmax 9.5 nm
VolumePorod 50 nm3

SASDHC4 – Trimeric complex of myosin A with myosin light chain (MLC1, residues 70-210) and essential light chain (TgELC1) from Toxoplasma gondii

Toxoplasma gondii essential light chain 1Myosin AToxoplasma gondii myosin light chain, residues 70-210 experimental SAS data
PYMOL model
Sample: Toxoplasma gondii essential light chain 1 monomer, 15 kDa Toxoplasma gondii protein
Myosin A monomer, 5 kDa Toxoplasma gondii protein
Toxoplasma gondii myosin light chain, residues 70-210 monomer, 17 kDa Toxoplasma gondii protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Sep 30
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 2.5 nm
Dmax 8.2 nm
VolumePorod 47 nm3

SASDHD4 – Trimeric complex of myosin A with myosin light chain (MLC1, residues 66-210) and essential light chain (TgELC2) from Toxoplasma gondii

Myosin essential light chain 2Myosin light chain TgMLC1, residues 66-210Myosin A experimental SAS data
PYMOL model
Sample: Myosin essential light chain 2 monomer, 15 kDa Toxoplasma gondii protein
Myosin light chain TgMLC1, residues 66-210 monomer, 17 kDa Toxoplasma gondii protein
Myosin A monomer, 5 kDa Toxoplasma gondii protein
Buffer: 20 mM HEPES pH 7.5, 150 mM NaCl, 0.5 mM TCEP, pH: 7.5
Experiment: SAXS data collected at EMBL P12, PETRA III on 2019 Sep 30
Structural role of essential light chains in the apicomplexan glideosome. Commun Biol 3(1):568 (2020)
Pazicky S, Dhamotharan K, Kaszuba K, Mertens HDT, Gilberger T, Svergun D, Kosinski J, Weininger U, Löw C
RgGuinier 2.7 nm
Dmax 10.0 nm
VolumePorod 50 nm3

SASDNU3 – Fibrillin PF2

Fibrillin-1 experimental SAS data
DAMMIF model
Sample: Fibrillin-1 monomer, 44 kDa Homo sapiens protein
Buffer: Tris buffered saline, pH: 7.4
Experiment: SAXS data collected at ID02, ESRF on 2006 Feb 11
Transglutaminase-Mediated Cross-Linking of Tropoelastin to Fibrillin Stabilises the Elastin Precursor Prior to Elastic Fibre Assembly. J Mol Biol 432(21):5736-5751 (2020)
Lockhart-Cairns MP, Newandee H, Thomson J, Weiss AS, Baldock C, Tarakanova A
RgGuinier 4.3 nm
Dmax 15.0 nm
VolumePorod 84 nm3

SASDJU9 – Mammalian cell entry protein 1A (Mce1A36-148)

Mce-family protein Mce1A monomer experimental SAS data
DAMMIN model
Sample: Mce-family protein Mce1A monomer monomer, 17 kDa Mycobacterium tuberculosis protein
Buffer: 50 mM Tris, 350 mM NaCl, 10% Glycerol, pH: 8.5
Experiment: SAXS data collected at B21, Diamond Light Source on 2019 May 10
Structural insights into the substrate-binding proteins Mce1A and Mce4A from Mycobacterium tuberculosis IUCrJ 8(5) (2021)
Asthana P, Singh D, Pedersen J, Hynönen M, Sulu R, Murthy A, Laitaoja M, Jänis J, Riley L, Venkatesan R
RgGuinier 2.1 nm
Dmax 8.7 nm
VolumePorod 29 nm3

SASDJV9 – Mammalian cell entry protein 4A (Mce4A39-140)

Mce-family protein Mce4A experimental SAS data
DAMMIN model
Sample: Mce-family protein Mce4A monomer, 15 kDa Mycobacterium tuberculosis (strain … protein
Buffer: 50mM MOPS, 350mM NaCl, 10% Glycerol, pH: 7
Experiment: SAXS data collected at B21, Diamond Light Source on 2019 May 10
Structural insights into the substrate-binding proteins Mce1A and Mce4A from Mycobacterium tuberculosis IUCrJ 8(5) (2021)
Asthana P, Singh D, Pedersen J, Hynönen M, Sulu R, Murthy A, Laitaoja M, Jänis J, Riley L, Venkatesan R
RgGuinier 2.1 nm
Dmax 7.8 nm
VolumePorod 22 nm3

SASDKJ4 – SARS-CoV-2 nsp7 and nsp8

Replicase polyprotein 1a - nsp7Replicase polyprotein 1a - nsp8 experimental SAS data
PDB (PROTEIN DATA BANK) model
Sample: Replicase polyprotein 1a - nsp7, 18 kDa Severe acute respiratory … protein
Replicase polyprotein 1a - nsp8, 44 kDa Severe acute respiratory … protein
Buffer: 50 mM Tris, pH 8.0, 100 mM NaCl, 4 mM DTT, 4 mM MgCl2, pH: 8
Experiment: SAXS data collected at EMBL P12, PETRA III on 2020 Jun 19
Hallmarks of Alpha- and Betacoronavirus non-structural protein 7+8 complexes Science Advances 7(10):eabf1004 (2021)
Krichel B, Bylapudi G, Schmidt C, Blanchet C, Schubert R, Brings L, Koehler M, Zenobi R, Svergun D, Lorenzen K, Madhugiri R, Ziebuhr J, Uetrecht C
RgGuinier 3.4 nm
Dmax 13.5 nm
VolumePorod 92 nm3